Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101967168
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Entry
101967168 CDS
T10664
Symbol
Tdg
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101967168 (Tdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iti03400
]
101967168 (Tdg)
Enzymes [BR:
iti01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
101967168 (Tdg)
DNA repair and recombination proteins [BR:
iti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
101967168 (Tdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
101967168
NCBI-ProteinID:
XP_005322402
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MEAENTGSYSLEQAQAFYSFPFQQMMTEAPDVAVMKEQQMPGEVPAPEPAQEPVQEAPKG
RKRKARTTEPKKPEEPKKPAESKKSGKSPKSKEKQEKITDAFKVKRKVDRFNGVSEAELL
TKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHT
LPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSK
EVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLK
GIERNTDVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYAEHLGNSEPCSFSE
DRLTDSAELRGESAFSDIPNGQWMTQSFTDQIPSFNNHCGTLEQGEGNPA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggaaaacacgggcagctattcccttgagcaagctcaagcattttattcattt
ccattccaacaaatgatgactgaagctcctgatgtggcagtcatgaaggaacagcagatg
ccaggcgaagttccagccccagaacctgctcaagaaccagtacaagaggctccaaaagga
aggaaaagaaaagccagaacaactgaaccaaaaaaaccggaggaacccaaaaaacctgct
gagtccaagaagtctggcaagtccccaaaatcaaaagaaaagcaagaaaagattacagat
gcatttaaagtaaaaagaaaagtggaccgttttaatggtgtttccgaagctgaacttttg
accaagactctccctgatattttgaccttcaatctggacattgtgattattggcatcaac
ccaggactaatggctgcttacaaagggcatcattatcctggacctgggaaccatttttgg
aagtgtctgtttatgtcagggctgagtgaggtgcagctcaatcacatggatgatcacact
ttaccagggaagtatggtattggatttaccaacatggtagaacggacgacgccaggcagc
aaggatctttccagtaaagaatttcgtgaaggaggacgtattctagtacagaaattacag
aaatatcagccacgaatagcggtgtttaatggaaaatgtatttatgaaatttttagtaaa
gaagtttttggagtaaaggttaagaacttggaatttgggcttcaaccccataagatccca
gatacagaaactctctgctatgttatgccatcgtccagtgcaaggtgtgctcagtttcct
cgagcccaggacaaagtccattactatattaagctgaaggacttaagagaccagttgaaa
ggcattgaacggaacacagacgttcaggaggtgcagtacacgtttgacctacagcttgcc
caagaggatgcaaagaagatggcagttaaggaagaaaaatatgacccaggctatgaagca
gcgtatggaggtgcttacgctgagcatctgggcaacagtgagccatgcagcttctctgag
gacaggctaactgacagtgcggagttaagaggagaatcagctttcagtgacattccaaat
gggcagtggatgacccagtcgtttacagaccagattccttcctttaataatcactgtgga
acgctggagcagggggaagggaaccctgcttaa
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