KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101968658
Entry
101968658         CDS       T10664                                 
Symbol
Cxcl12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
  KO
K10031  C-X-C motif chemokine 12
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04060  Cytokine-cytokine receptor interaction
iti04061  Viral protein interaction with cytokine and cytokine receptor
iti04062  Chemokine signaling pathway
iti04064  NF-kappa B signaling pathway
iti04360  Axon guidance
iti04670  Leukocyte transendothelial migration
iti04672  Intestinal immune network for IgA production
iti04810  Regulation of actin cytoskeleton
iti05163  Human cytomegalovirus infection
iti05200  Pathways in cancer
iti05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:iti00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    101968658 (Cxcl12)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    101968658 (Cxcl12)
   04061 Viral protein interaction with cytokine and cytokine receptor
    101968658 (Cxcl12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    101968658 (Cxcl12)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    101968658 (Cxcl12)
   04672 Intestinal immune network for IgA production
    101968658 (Cxcl12)
   04062 Chemokine signaling pathway
    101968658 (Cxcl12)
  09158 Development and regeneration
   04360 Axon guidance
    101968658 (Cxcl12)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101968658 (Cxcl12)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    101968658 (Cxcl12)
  09163 Immune disease
   05323 Rheumatoid arthritis
    101968658 (Cxcl12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:iti04052]
    101968658 (Cxcl12)
   00536 Glycosaminoglycan binding proteins [BR:iti00536]
    101968658 (Cxcl12)
Cytokines and neuropeptides [BR:iti04052]
 Cytokines
  Chemokines
   101968658 (Cxcl12)
Glycosaminoglycan binding proteins [BR:iti00536]
 Heparan sulfate / Heparin
  Chemokines
   101968658 (Cxcl12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 101968658
NCBI-ProteinID: XP_005334465
UniProt: I3M6Z7
LinkDB
Position
Unknown
AA seq 119 aa
MDTKVVVVLALVLAALCLSDGKPVSLSYRCPCRFFESHVARVNVRHLKILNTPNCSLQIV
ARLKSNNRQVCIDPKLKWIQEYLEKALNKGRREEKVGKKEKIGKKKRQKKRKAAQKRKN
NT seq 360 nt   +upstreamnt  +downstreamnt
atggacaccaaggtcgtcgtcgtactggccctagtgctggctgcgctctgcctcagcgac
ggaaaacccgtcagcctgagctacagatgtccatgccgattcttcgaaagccatgttgcc
agagtcaatgtcaggcatctcaaaatcctcaacactccgaattgctctctccagattgtt
gcaagactgaagagcaacaacagacaagtgtgcattgacccgaaattaaagtggattcag
gaatacctggagaaagctttaaacaaggggcgcagagaagaaaaagtggggaaaaaagaa
aagataggaaaaaagaagagacagaagaagagaaaggctgctcagaaaaggaaaaactag

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