KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101969512
Entry
101969512         CDS       T10664                                 
Symbol
Aff4
Name
(RefSeq) AF4/FMR2 family member 4 isoform X1
  KO
K15185  AF4/FMR2 family member 4
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    101969512 (Aff4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:iti03021]
    101969512 (Aff4)
Transcription machinery [BR:iti03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     101969512 (Aff4)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 101969512
NCBI-ProteinID: XP_005335812
UniProt: I3NFW1
LinkDB
Position
Unknown
AA seq 1160 aa
MNREDRNVLRMKERERRNQEIQQGEDAFPPSSPLFAEPYKVTSKEDKLSSRIQSMLGNYD
EMKDFIGDRSIPKLVAIPKPTVPPTADEKSNPNFFEQRHGGSHQSSKWTPVGPAPSTSQS
QKRSSGLQSGHSSQRTSAGSSSATNSTGQRHDRDSYSSSRKKSQHGSEHSKSRSSSPGKP
QAVSSLSSSHSRSHGNDHHSKEHQRSKSPRDPDANWDSPSRVPFSSGQHSNQSFPPSLMS
KSSSMLQKPTAYVRPMDGQESMEPKLSSEHYSSQSHGNSMTELKPSSKAHLTKLKIPSQP
LDASASGDVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKETQQSNFGPGEQKR
YNPSAKTSNGHQSKSMLKDDLKLSSSEDSDGEQDCDKTMPRSTPGSNSEPSHHNSEGADN
SRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNKVNP
HKVSPASSVDSNIPSSQGYKKEGREQGPGNSYADSGGPKETSSATPGRDSKTVQKGSESG
RGRQKSPAQSDSTTQRRTVGKKQPKKAEKAAAEEPRGGLKIESETPVDMATSMPSSRHKA
ATKGSRKPNIKKESKSSPRPTAEKKKYKSTSKSSQKSREIIETDTSSSDSDESESLPPSS
QTPKYPDSNRTPVKPSSVEEEDSFFRQRMFSPMEEKELLSPLSEPDDRYPLIVKIDLNLL
TRIPGKPYKETEPPKGEKKNMSEKHTREAQKQASEKVSSKGKRKHKNEDDNRASESKKPK
TEEKNSSGHKPSSNRESSKQSVAKEKELLPSPAGPVPSKDPKTEHGSRKRTISQSSSLKS
SSNSNKENSGSSKNSSSAAKQKKTEGKTSSSSKEVKEKAPNSSSNCPPSTPTPDASKPRR
TKLAFDDRNYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKNAQES
KSPFPMYSDTVELIKYTMKLKNYLAPDATAADKRLTVLCLRCQSLLYLRLFKLKKENALK
YSKTLTEHLKNSYNNSQAPSPGLGSKAVGMPSPVSPKLSPGNSGNYSSGGSSASASGSSV
TIPQKIHQMAASYVQVTSNFLYATEIWDQAEQLSKEQKEFFAELDKVMGPLIFNASIMTD
LARYTRQGLHWLRQDAKLIS
NT seq 3483 nt   +upstreamnt  +downstreamnt
atgaaccgtgaagaccggaatgtgctgcgtatgaaagaacgggaaaggcggaatcaggaa
attcagcagggtgaagacgccttcccacctagctctcctctctttgctgaaccatacaaa
gtcactagcaaagaagataagttatcaagtcgtattcagagtatgctcggaaactacgat
gaaatgaaggatttcataggagacagatcaataccgaagcttgttgcaattcccaagcct
actgtaccaccgacagcagatgaaaaatcaaacccaaatttctttgaacagagacatgga
ggctctcatcagagtagcaagtggactccagtaggacctgcacccagcacttctcagtct
caaaaacggtcctcaggcttacagagtggacatagtagccagaggaccagtgcaggtagt
agcagtgccactaatagtactggccagaggcatgaccgtgactcatatagcagtagccgg
aaaaaaagccagcatggatcagaacactccaaatcacgatcttctagccctggaaaaccc
caggctgtttcttcattaagctctagtcattccaggtctcatgggaatgatcatcatagc
aaggaacatcagcgttccaaatcacctagggatccagatgccaattgggattctccttcc
cgagtacctttttcaagtgggcagcactcaaatcagtctttcccaccttcgttgatgtca
aagtccagttcaatgttacagaaacccactgcctatgtgcggcccatggatggacaggag
tccatggaaccaaagctatcctctgagcactacagcagccaatcccatggcaacagcatg
actgagctgaagcccagcagcaaagcacatcttaccaagctgaaaataccttcccaacca
ctagatgcatcagcttctggtgatgtgagctgtgtggatgaaattcttaaagagatgacg
cattcatggcctccccctctaacggctattcatacaccatgcaaaacagaaccttccaaa
tttccttttccaactaaggagactcagcaatccaattttggccctggagaacaaaaaaga
tacaatccttctgctaaaacttcaaatgggcaccagtctaaatctatgttaaaagatgac
ttaaaactaagcagcagtgaagacagtgatggggaacaggactgtgataaaacaatgcca
aggagtacaccaggaagtaattctgaaccttcacatcataatagtgaaggagcagataac
tccagggatgattctagcagccatagtggatctgaaagcagctctggatctgattcagag
agtgaaagtagttccagtgacagtgaggcaaatgaaccatcccagagtgcatctcctgag
cctgaaccaccaccaacaaacaaatggcaacttgataactggttaaataaagtgaaccca
cataaagtttcaccagcgtcttctgtggacagtaacatcccatcctctcaaggctacaaa
aaagaaggccgagaacagggccctgggaatagctatgcagattcaggagggcctaaggaa
acaagttctgctactcctggacgagactccaaaactgtccaaaagggatcagaaagtggg
cgtggtagacagaagtctccagcacagagtgacagcacaacacagaggagaactgtaggc
aaaaaacaacccaaaaaagctgagaaggcagctgctgaagagcctcgtggaggcctgaag
atagaaagtgaaacccctgtagacatggctaccagcatgccctccagcagacacaaagca
gccaccaaaggctcaaggaaacccaatataaagaaggagtctaaatcttccccacgacct
actgcagagaaaaagaaatacaagtcaacaagtaaatcttcccagaaatcgagggaaatc
atagaaacagatacctcatcctcagattcagatgaaagtgagagcctccctccttcttct
caaactcctaagtatcctgatagtaataggactcccgttaaaccctcctctgtggaggaa
gaagatagtttttttcggcaacgaatgttctctcctatggaagagaaggaactcctttca
cccctcagtgagcctgatgacaggtatccacttattgtgaagattgacctgaatctcttg
actcgaataccgggaaagccttataaagaaactgaaccacccaagggggaaaagaaaaat
atgtcagaaaaacacacccgagaagctcagaagcaagcctcagaaaaagtttccagcaaa
ggcaagaggaaacataagaatgaagatgataaccgagccagtgagagcaaaaaaccgaaa
acagaggaaaagaactcatctggccacaagccatccagcaacagagagtcatcaaagcag
agcgttgcaaaagaaaaggagttgttaccttcacctgctgggcctgttccttcaaaagac
ccaaaaacagagcatggctctcggaagaggactattagtcagtcatcttccttaaagtca
agcagtaatagtaacaaggagaatagtggcagcagcaaaaacagttcctctgcagcaaaa
cagaagaagacagaagggaagacttccagtagctccaaggaggttaaggaaaaggctcca
aatagctcctctaactgtcctccatctacaccgactcctgatgcttctaagcctcggaga
acaaagctcgcctttgatgacagaaattattcagcagaccattatctacaagaagcaaaa
aagctaaagcacaatgcagatgcattgtccgataggtttgaaaaagcagtatactatctt
gatgctgtggtatctttcattgaatgtgggaatgcattagagaagaatgctcaggaatcc
aaatccccattccctatgtattcagacacagtggagcttatcaaatacactatgaagcta
aagaattacttggcaccagatgctacagctgcagataaaagactcacagtactttgcctg
agatgccaatctttgctgtacctgaggctcttcaaactgaagaaggaaaatgctctgaag
tactcaaagacactgacagagcacctgaagaattcttataataattctcaagcaccatca
cctggtttggggagcaaagccgttgggatgccttcccctgtttctccaaagctgtcacca
ggcaattcgggaaattattcttctgggggcagtagtgcttcagcaagtggctcttcagtg
accattccacagaagatccaccagatggcagccagctatgttcaggttacatctaacttc
ctctatgccactgaaatttgggaccaagctgaacagctttccaaagaacaaaaagaattc
tttgctgaactggataaagtaatgggcccactcatctttaatgcaagcatcatgacagat
ctagctcgttatacccggcagggactgcactggcttcgccaagatgccaagttgatatct
tga

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