Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101969840
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Entry
101969840 CDS
T10664
Symbol
Hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00280
Valine, leucine and isoleucine degradation
iti00650
Butanoate metabolism
iti00900
Terpenoid backbone biosynthesis
iti01100
Metabolic pathways
iti03320
PPAR signaling pathway
Module
iti_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
101969840 (Hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
101969840 (Hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
101969840 (Hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
101969840 (Hmgcs1)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
101969840 (Hmgcs1)
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GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Cullin
Motif
Other DBs
NCBI-GeneID:
101969840
NCBI-ProteinID:
XP_005319719
UniProt:
I3M6J1
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MPGSLPLNAEACWPKDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCT
DREDINSLCLTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDI
EGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAIYATGNARPTGGVGAVALL
IGPNAPLIFDRGLRGTHMQHAYDFYKPDMVSEYPIVDGKLSIQCYLSALDRCYSVYRKKI
RAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQKSLARMMLNDFLNDQNRDKNTIYSGLEA
FGDVKLEDTYFDRDVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQY
SPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSRTCVAP
DIFAENMKLREDTHHLANYIPQCSIDSLFEGTWYLVRVDEKHRRTYARRPSPNDDTLGEG
VGLVHSNTATEHIPSPAKKVPRLPASAAEPEVAVISNGEH
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtcacttcctttgaatgcagaagcttgttggccaaaagatgtgggaattgtt
gcccttgagatctattttccttctcaatatgttgatcaagcagagttggaaaaatatgat
ggtgtagatgctggaaagtataccattggcttgggccaggccaggatgggcttctgcaca
gatcgagaagatatcaactctctttgcctaactgtggttcagaatctaatggagagaaat
aacctttcttatgattgcattggacggttagaagttggaacagagacaatcattgacaaa
tcaaagtcagtgaagactaatttgatgcaactatttgaggagtctgggaatacagatata
gaaggaatagatacaactaatgcgtgctatggaggcacagctgctgtcttcaatgctgtt
aactggattgagtccagctcttgggatggacggtatgccctggtagttgcaggagatatt
gctatatatgccacaggaaatgccagacctacaggtggagttggagctgtggctttgctg
attgggccaaatgctcctttaatttttgaccgagggcttcgtggaacacatatgcaacat
gcctatgatttttacaaacccgatatggtctccgaatatcctatagtcgatggaaaactc
tccatacaatgctacctcagtgcattagaccgctgctattctgtctaccgcaaaaagatc
cgtgcccagtggcagaaagagggaaatgataaagattttaccttaaatgattttggcttc
atgatctttcactcaccatattgtaaactggttcagaaatctctagctcggatgatgctg
aatgacttccttaatgaccagaacagagataaaaatactatctacagtggcctggaagct
ttcggggatgtaaagttagaagatacttactttgacagagatgtggaaaaggcatttatg
aaggctagttctgaactctttaatcagaaaacaaaggcatctttgctggtatcaaatcaa
aatggaaatatgtatacatcctcagtatatggttcccttgcttctgttctagcccagtac
tctcctcagcaattggcagggaagaggataggagtgttctcttatggttctggtttggct
gccactttgtactctcttaaagttacacaagatgccacaccagggtctgctcttgataaa
ataacagcaagtttatgtgatcttaaatcaaggcttgactcaagaacttgtgtagcacca
gatatctttgctgaaaacatgaagctcagagaggacactcatcacttggccaactatata
ccccagtgttcaatagattcactctttgaaggaacatggtacctagttagagtggatgaa
aagcatagaagaacgtacgctcgtcgcccctctccaaatgatgacactttgggtgaagga
gtaggacttgtgcattcaaatacagcaactgagcatattccaagccctgctaagaaagtg
ccaaggctccctgcatcagcagcagaacccgaagtagctgtcattagtaatggggaacat
taa
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