Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101969880
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Entry
101969880 CDS
T10664
Symbol
Rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123 isoform X2
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101969880 (Rnf123)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101969880 (Rnf123)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101969880 (Rnf123)
Multi subunit type E3
KPC complex
101969880 (Rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_RNF123
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
101969880
NCBI-ProteinID:
XP_005326988
UniProt:
I3N8C2
LinkDB
All DBs
Position
Unknown
AA seq
1314 aa
AA seq
DB search
MASKGAGMSFSRKSYRLTSDAEKSRVTGIVHEKLLNDYLHRIFSSPDHVPPAATSRKPLN
FQNLPEHLDQLLQVDNEDEESQGQVEGRLGPSTVVLDHTGGFEGLLLVDDDLLGVIGHSN
FGTIRSTTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNRVRK
WNVTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGIAFENLSRGLGMAYFPAISLS
FKESVAFNFGSRPLRYPVAGFRPLQDPPCADLVRAQRLLGCFRAVLSVELDPVEGRLVEK
ESSEWQLQGQPTILLTLAHIFQRFAPLLRKVYLVEAVLMSFLLGITEKGTPAQAQSLVHQ
VLDLLWLFMEDYEVQDCLKQLMMSLLRLYRFSPIVPDLGLQIHYLRLTISILRHQKSRKF
LLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPHRSSREGRESKEVNEETAEER
LRRRAYERGCQRLKKRIEVVEELQVQILKLLLDNKDDNGGEASRYIFLTKFRKFLQENAS
GRGNMPMLCPPEYMVCFLHRLISALRYYWDEYKASNPRASFSEEAYIPPQIFYNGKVDYF
DLQRLGGLLSHLRKTLKDDLASKANIVIDPLELQAATMDDLDEDDEATPAGTQRPMQALA
IGGALPLPRPGWLSSPTLGRANRFLSTAAVSLMTPRRPLSTLEKVKVRTLSVEQRTREDI
EGSHWNEGLLLGRPPEEPEQPLTENSLLEVLDGAVMMYNLSVHQQLGKMVGVSDDVNEYA
MALRDTEDKLRRCPRRRKDILAELTKSQKVFSEKLDHLSRRLAWVHATVYSQEKMLDIYW
LLRVCLRTIEHGDRTGSLFAFMPEFYLSVAINSYSALKNYFGPVHSMEELPGYEETLTRL
AAILAKHFADTRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEDQRIAMVRNLLAPYEQ
RPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSTLLQQHMADLLR
QGSDVAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVS
LLRVLEMTITLVPEIFLDWARPTSEMLLRRLAQLLNQVLNRVTAERNLFDRVVTLRLPGL
ESVDHYPILVAVTGILVQLLVRGQASETERATSVLLADPCFQLRSICYLLGQPEPPAPGT
VLPAPDRKRFSLQSYTDYINAEELAQVEQMLTHLTFASAQAAAASLPTSEEDLCPICYAH
PISAVFQPCGHKSCKACINQHLMNNKDCFFCKATIVSVEDWDKAANTSTTSSAA
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaagggggccggcatgtctttctcccgcaagagctataggctgacctcagat
gctgagaaatccagggtcacaggcattgtgcacgagaagctgctgaatgactacctacac
cgcatcttttcctctcctgaccatgtaccccccgcagccaccagcaggaaacccctgaac
ttccagaacctgccagagcatctggaccagctgctacaggtggacaatgaggatgaggaa
agccagggacaagttgaaggacggcttggtccatccaccgtggtcctggaccacacagga
ggatttgaggggcttctcctagttgatgatgatctcttgggggtgattggacacagcaat
tttggcactatccgctctaccacatgtgtgtacaaagggaaatgggtctatgaggtgctc
atctcctcccaggggctcatgcagatcggctggtgcaccatcaactgccgctttaatcag
gaggaaggggttggagatacacacaactcctatgcctatgatgggaaccgggtgcgcaag
tggaatgtgactacaacaaattatggcaaggcatgggcagcgggggacattgtgagctgc
ctgattgatctggatgatggtactctgtctttctgcctgaatggtgtgtcactgggcatt
gcctttgagaacctgtccaggggcctgggcatggcctacttcccagccatcagcttgtct
ttcaaggagtctgtggccttcaactttggcagccgtcctctacgctacccagtcgccggc
ttccggcccctgcaggacccaccatgtgctgacctggtgagagcacagaggttgctgggc
tgcttccgggcagtgcttagtgtggagctggatcctgtggaaggtcgactagtggaaaag
gaaagctctgagtggcagttgcaaggacagcccaccattctcctcacactggcccacatc
tttcagcgttttgcaccactcctgcgcaaggtgtatctggtagaggctgtgctcatgagc
ttcctgttgggcatcacggagaagggcacacctgcacaggcacagtccctggtacaccag
gttctagacctcttgtggctcttcatggaggactacgaggtacaggattgccttaagcag
ttgatgatgtctctgctgcggctgtaccggttctcacccatcgttccagatctgggcctg
cagatccactacctgcgactcactatctccattctgaggcaccagaagtcccgcaaattt
ctgcttagcaacgttctcttcgacgtgctccggtctgttgtcttcttttatatcaagagt
cccctgcgtgtagaggaagctggcctgcaggagctcattcctaccacctggtggccccac
cgttccagcagggagggcagagagagtaaggaggtaaatgaagagactgctgaggagcgg
ctacggcggcgagcttacgagcggggctgccaaaggctgaagaaacgcattgaagtggtg
gaagaactacaggtccagatcctgaagctgctattggacaataaagatgataatgggggt
gaagcttctagatacatcttcctgaccaagttccgaaagtttctgcaggagaatgccagt
ggccgtgggaacatgcctatgctctgcccccccgaatacatggtctgctttttgcaccgg
ctcatctctgccctccgctactattgggatgaatacaaggcctccaacccccgtgcttcc
ttcagtgaggaagcttacatcccaccccagatcttctataatggcaaggtggactacttt
gacctgcaacgccttgggggcctcctgtcacatcttcgaaagaccctcaaagatgacctt
gcttccaaagccaacattgtgattgacccactggaactccaggcagccactatggatgac
ctggacgaggatgatgaggcaaccccagctgggacccagcgccccatgcaggccctggcc
attgggggagcactgcccttgccccggcctggctggctcagttctccaactctgggccga
gccaaccgcttcctcagcacagcagctgtgagcctcatgaccccacggcggcctctgagc
accttggagaaagtgaaggtccgcacgctgagtgtggagcagaggacccgtgaggacatt
gagggcagccactggaatgagggcctgctgctaggacggccccctgaggaacctgagcag
cccctcaccgagaactcactgctggaagttctagatggtgccgtcatgatgtataatctc
agcgtccaccagcagctaggcaagatggttggtgtatctgatgatgtcaatgaatatgcg
atggctctgagagacacggaggacaagcttcgccggtgccctaggcggaggaaggatatc
cttgcagagttgaccaagagccagaaagttttctcagaaaagctggaccacctgagccgc
cgtcttgcttgggttcatgctaccgtctattcccaggagaaaatgctagacatttactgg
ctactgcgtgtctgcctacggaccattgagcatggtgatcgcacaggttctctctttgcc
ttcatgcctgagttctacctgagtgtggccatcaacagctacagtgctctcaagaattat
tttggtcctgtgcacagcatggaggagctcccaggctatgaagagaccctgactcgcctg
gctgccatccttgccaaacactttgctgacacacgcatagtaggcactgacattcgagac
tcactgatgcaggccttggccagctacgtgtgctacccacactctctgcgggctgtggaa
agaatccctgaggatcagcgtatcgccatggtgaggaatctcctggcaccctatgagcag
cggccctgggcccagaccaactggatcctagtgcggctctggaggggctgtgggttcggg
taccgctatacacggctgccacacctgctgaaaaccaagccagaggatgccaatttgccc
agcctccagaaaccctgcccctctaccctgctgcagcagcacatggcagacctgctgcgg
cagggttctgatgtggcacccagcttcctcaacagtgtcctcaaccaactcaactgggct
ttctctgagtttatcggcatgatccaggagattcagcaggctgctgaacgcctggaacga
aactttgtggacagcagacagctcaaggtatgtgccacctgctttgacctctcagtcagc
ctgctgcgtgtcttggaaatgaccatcacactggtgcctgagatattccttgactgggcc
cggcctacctctgagatgctgctgcggcgtcttgcacagctgctgaatcaggtgctgaac
cgtgtgacagctgagaggaacttgtttgaccgtgtggtcaccctacgactacctggccta
gaaagtgtggaccactaccctatccttgtggcagtgacaggcatcctggtacagctcctg
gtgcgtggtcaagcctcagagacagagagagctacatcagtgcttttggctgacccctgc
ttccagctgcgatccatatgctatcttttggggcagccagagcctccagcacctggcact
gtcctgcctgccccagaccggaagcgcttctccctgcagagctatactgattatatcaat
gctgaggagctggcacaagtggaacagatgctgacacatctgacctttgcatctgcccag
gcagcagctgcatccctgcccaccagtgaggaagatctctgcccaatctgttatgcccac
cccatctctgctgtgttccagccctgtggacacaagtcctgcaaagcctgcatcaaccag
cacctgatgaacaataaggattgcttcttctgcaaagccaccatcgtgtctgtagaggac
tgggacaaggcagctaatacaagcaccacctcctcagctgcctag
DBGET
integrated database retrieval system
