Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101973720
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Entry
101973720 CDS
T10664
Name
(RefSeq) rap guanine nucleotide exchange factor 3
KO
K08014
Rap guanine nucleotide exchange factor 3
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04015
Rap1 signaling pathway
iti04024
cAMP signaling pathway
iti04072
Phospholipase D signaling pathway
iti04081
Hormone signaling
iti04261
Adrenergic signaling in cardiomyocytes
iti04670
Leukocyte transendothelial migration
iti04720
Long-term potentiation
iti04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
101973720
04072 Phospholipase D signaling pathway
101973720
04024 cAMP signaling pathway
101973720
09133 Signaling molecules and interaction
04081 Hormone signaling
101973720
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
101973720
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
101973720
09156 Nervous system
04726 Serotonergic synapse
101973720
04720 Long-term potentiation
101973720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XendoU
RasGEF
DEP
cNMP_binding
RasGEF_N
Somatomedin_B
EndoU_bacteria
Motif
Other DBs
NCBI-GeneID:
101973720
NCBI-ProteinID:
XP_040137775
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MKVGLPGESRWQVGPAVEDNLALGAPQVGGLPDLVPEGTLLNMVLKRMHRPRSCSYQLLL
EHQRPSRIQGLRWTPLTNSEESLDFSVSLEQASTERVLRAGKHLHRHLLATCPTLIRDRK
YHLRLYRQCCSGRELVDWVLALGLGVHSRSQAVGICQVLLDEGALCHVKHDWTFQDRDAQ
FYRFPGPEPEPTGAHEMEEELVEAMALLSQRGPDALLTVALRKPPGQRTDEELELIFEEL
LHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTSWYIIWKGSVNVVTHGKGL
VTTLHEGDDFGQLALVNDAPRAATIILREDNCHFLRVDKQDFNRIVKDVEAKTMRLEEHG
KVVLVLERASQGTGPSRPPTPGRNRYTVMSGTPEKILELLLEAMRPDSSAHDPTETFLSD
FLLTHSVFMPSAQLCAALLHHFHVEPAEPAGGSEQERSTYICNKRQQILRLVSQWVALYG
PMLHTDPVATSFLQKLSDLVSRDARLSNLLREQWPERRRHHRLENGCGNASPMMKVPAQS
QQGSPFFPLPIQLPYLEGPMWGGSPPTDKPLSDPSHSSAPSSSPVPYDICLPDHSVLTLQ
LPVTASVREVMAALAQKDGWTKGQVLVKVNSAGGSEERPMRSPVCSALGSTALWWPPDAV
GLQPDARGVATSLGLNERLFVVDPQEVHELTPHPEQLGPTVGSAEGLESVSAKDLAGQLT
DHDWNLFNSIHQVELIHYVLGPQHLRDVTTANLERFMRRFNELQYWVATELCLCPVPGLR
AQLLRKFIKLAAHLKEQKNLNSFFAIMFGLSNSAISRLAHTWERLPHKVRKLYSALERLL
DPSWNHRVYRLALTKLSPPVIPFMPLLLKGGERSLGTQKQNHPFADMTFIHEGNHTLVEN
LINFEKMRMMARAVRMLHHCRSHSTVPLSPLRSRVSHFHEDSQASRISTSKEEPEEFLEL
EEEAPDNSLYSAPSSCQGRCREAFDKHHPCHCNDRCQEFGNCCKDFESLCGDHEGFSHSS
DAITKEELQSISEKIYKADTNKAQKEDIVLNSQNRISPSETGDQVDRCPEPLFTYVNEQL
FSKPTYAAFINLLNNYQRATGHGEHFNAQQLAEQGVFLREIMKTAVMKELFSFLHHQNRY
GSEQEFVDDLKNMWFGLYSRGNEEADSSGFEHVFSGEIKKGKVTGFHNWIRFYLQEKEGL
VDYYSHNYDGPWDSYPDVLAMQFNWDGYYKEVGSAFIGSSPEFEFALYSLCFIARPGKVC
QLSLGGYPLAIQTYPWDKTTYGNGKKYIATAYVVSSTH
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgggcttgccaggtgagagccgctggcaggtgggcccggctgtggaggataac
ctggctctgggagcaccgcaagttgggggcctccctgacttggtgccagaggggacactg
ctcaacatggtgctgaagaggatgcatcgacccagaagctgctcctaccagctgctgctt
gagcaccagcgccccagccgcatccaggggcttcgatggacgccgctcaccaacagcgag
gagtccctggatttcagtgtgagcctggagcaggcttccacagagcgggtgctccgggct
ggaaagcacctgcaccgacatctcctggccacctgcccgaccctcatccgtgaccggaag
tatcatctcaggctctaccggcagtgctgttctggtcgggagctggtggactgggtcttg
gccctggggcttggggtccactctcggagccaggctgtgggcatctgccaggttctgctg
gatgaaggtgccctctgccatgtgaaacacgactggaccttccaggaccgagatgcccag
ttttaccggttccctgggccagagccggagcccacaggagctcatgagatggaggaggag
ttggtggaggccatggcgctgctctcccagcgggggcccgatgccctgctcactgtagca
cttcgaaagcccccaggtcagcgcacagatgaggagttagaacttatcttcgaggagctc
ctgcacatcaaggccgtggcccacctctccaactcggtgaagcgggaattagcagcagtt
ctgctctttgaaccacatagcaaggcaggcactgtgttgttcagccagggggacaaaggc
acctcatggtacattatctggaaggggtctgtcaacgtggtgacccatggcaaggggctg
gtgaccacactgcatgagggagatgactttggacagttggctctggtgaatgatgcaccc
cgggcggccaccatcatcctgagagaagataactgtcactttctacgtgtggacaagcag
gatttcaaccgcattgtcaaggatgtggaagcaaagaccatgagactggaagaacacggc
aaagtggtgttggtgttggagagagcctctcagggcactggcccttctcgccccccgacc
cctggcaggaaccggtacacagtgatgtctggcaccccagagaagatcctagaacttctc
ttagaagccatgcggccggattccagtgctcatgacccaacagagacattcctcagtgac
ttcctcctgacccacagcgtcttcatgcccagtgcccagctctgcgctgccctcctgcac
cacttccacgtggagcccgcagagcctgcgggaggcagcgagcaggagcgcagcacttac
atctgcaataagaggcagcagattctgcgtctagtcagccagtgggtggccctctatggc
cccatgctccacacagaccctgtggccaccagcttcctccagaaactctcagacctggtg
agcagggacgcccgacttagcaacctgctgagggagcagtggccagagaggcggcgacac
cacaggttggaaaatggctgtgggaacgcttctcctatgatgaaggtacctgcccagtct
cagcagggctcccccttcttccctctgcccatccagctcccttacctggaggggcccatg
tgggggggttccccacccacagacaagcccttgagcgacccctcccacagctcagcccca
tcctcctctccagtcccctatgacatctgcctcccggaccattccgtgctgaccctgcag
ctacctgtgacagcctctgtgagagaggtgatggcagcattggcccagaaggacggctgg
accaaggggcaggtgctggtgaaggtcaattctgcaggtggaagtgaggaaagaccaatg
aggtcacctgtgtgctctgctctgggaagcactgccctctggtggccacctgatgctgtt
ggcctgcagccagatgcccgtggtgtggccacatccctggggctcaacgagcggctcttt
gttgtcgacccacaggaagtgcatgagctgaccccacacccagagcagctgggacccact
gtgggctctgctgaggggctggagtcagtgagcgccaaggacctggcaggccagctgaca
gaccacgattggaacctcttcaacagtatccaccaggtggagctgatccactatgtactg
ggcccccagcatctgcgggatgtcaccactgccaacctggagcgcttcatgcgccgcttc
aatgagctgcagtactgggtggctacggagctctgtctctgccctgtgcccggcctgaga
gcccagctgctcaggaagtttatcaagctggcggctcacctcaaggagcaaaagaatctc
aattccttctttgccatcatgtttggccttagcaactcagccatcagtcgcctggcccac
acctgggagcgactgccccacaaagtccggaagttatactcagccctggagaggctgctg
gacccttcgtggaaccaccgagtgtatcgactggccctcaccaagctctcccctcccgtc
atccccttcatgccccttctcctcaaaggaggggaacggagtctgggaacccagaagcaa
aaccatccctttgcagacatgaccttcatccacgaggggaaccatacactagtggagaat
ctcatcaactttgagaagatgagaatgatggccagagccgtgaggatgctgcaccactgc
cgaagccacagcactgtgcctctctcaccactcagaagccgagtgtcccactttcacgag
gacagccaggcatcgaggatttccacatccaaggaggagccagaggaattcttggagctg
gaagaagaggccccggataatagcttgtactcggcgcccagctcttgccagggccgctgc
cgcgaagccttcgacaagcaccacccctgccactgcaatgaccgctgccaagagtttggg
aactgctgcaaggatttcgagagtctgtgtggcgaccacgagggcttctcccacagcagc
gatgccataaccaaagaggagcttcagagcatctctgagaagatctacaaggcagacacc
aacaaggcccagaaggaagacatcgttctcaacagtcaaaaccgcatctccccttcagag
acgggagaccaagtggatcgctgcccagagccgctcttcacctatgtcaatgagcagctg
ttctccaagcccacctacgcagccttcattaacctgctcaacaactaccagcgggcaacg
ggccatggggagcacttcaatgcccagcagctggccgaacagggtgtcttcctcagagag
atcatgaagacggcagtcatgaaggagctcttcagctttctccatcaccagaaccgctat
ggctcagaacaagaattcgttgacgacttgaagaatatgtggtttgggctctattcaaga
ggcaatgaagaggcggactccagtggctttgaacatgtcttctcaggtgaaatcaaaaag
ggcaaggtcactggcttccataactggatccgcttctacctgcaggagaaggagggcctg
gttgactattacagccataactatgatggaccttgggattcctaccctgacgtgttagcg
atgcagtttaactgggatggctactataaggaagtgggctcagctttcattggcagcagc
cctgagtttgagtttgcactctactccttgtgcttcattgcccggccaggcaaagtgtgc
cagttaagcctgggtggatatcccttggctatccagacctatccctgggacaagactacc
tatggaaatggcaagaagtacattgccacggcctacgtggtgtcttccacccattag
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