Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101974960
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Entry
101974960 CDS
T10664
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04140
Autophagy - animal
iti05014
Amyotrophic lateral sclerosis
iti05022
Pathways of neurodegeneration - multiple diseases
Brite
Membrane trafficking [BR:
iti04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
101974960 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
101974960
NCBI-ProteinID:
XP_005334240
UniProt:
I3MFZ1
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSTLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTDQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDMAQDTIIYTDESF
TPDLNIFQDVLHRDTLVKAFLDQVFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKIDLELTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctctgcccaccaccatctcctgctgttgccaagacagagattgctttaagt
ggtgaatcacctttattagcagctacctttgcttactgggacaatattcttggtcctaga
gtaaggcatatttgggcccctaagacagatcaggtacttctcagtgatggagaaataact
tttcttgccaaccacaccctaaatggagaaattcttcgaaatgcagagagtggggctata
gatgtaaagttttttgtcttgtctgaaaaaggagtaattattgtttcattaatcttcgat
ggaaactggaatggagatcggagtacttatggactatcaattatacttccacagacggag
cttagtttctatctcccacttcacagagtgtgtgttgatagattaacacatattattcgg
aaaggacggatatggatgcataaggaaaggcaagaaaatgtccagaagattgtcttagaa
ggcacagagagaatggaagatcagggtcaaagtattattccaatgcttactggagaagtc
attcctgtaatggaactgctttcatctatgaaatctcacagtgttcctgaagaaatagat
atagctgatacggtactcaatgatgatgatattggtgacagttgtcatgaaggctttctt
ctcaatgccatcagctcacacttgcaaacctgtggctgctctgttgtagtaggcagcagt
gcagagaaagtaaataagatagtgagaacattatgcctttttctgactccagcagagaga
aaatgctccagattatgtgaagcagaatcatcatttaaatatgagtcaggactctttgtg
caaggcctgctaaaggattcaactggaagctttgtactgcccttccgtcaagtcatgtat
gcaccatatcccaccacacatatcgatgtggatgtcaatactgtgaagcagatgccaccc
tgtcatgaacacatttataatcagcgtagatacatgagatcggagctgacagcattttgg
agagccacttcagaagaagacatggcacaggacaccatcatctacacagatgagagcttc
actcctgatttgaatattttccaggatgtcttacacagagacactctagtcaaagccttc
ctggatcaggtctttcatttgaaacctggtttatctctcaggagtactttccttgcacag
tttctgcttgtccttcacagaaaagccttgacactaataaaatacatagaagatgatacg
cagaaggggaaaaagccctttaaatctcttcgaaatctgaagatagaccttgaattaaca
gcagagggcgatcttaacataataatggctctagcagagaaaatcaaaccaggcctacat
tcttttatctttggaagacctttctacacaagtgtacaagaacgagatgtcctaatgact
ttttaa
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