Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101975614
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Entry
101975614 CDS
T10664
Symbol
Nup210l
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03013
Nucleocytoplasmic transport
iti05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101975614 (Nup210l)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101975614 (Nup210l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101975614 (Nup210l)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101975614 (Nup210l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_7th
Ig_NUP210_4th
Ig_NUP210_9th
Ig_NUP210_1st
Ig_NUP210_15th
NUP210_Ig
Big_2
Ig_NUP210_6th
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-GeneID:
101975614
NCBI-ProteinID:
XP_040145058
LinkDB
All DBs
Position
Unknown
AA seq
1647 aa
AA seq
DB search
MINLGATVLICRVPLGRLLCLSLALFGTLANKLNVPQVLLPFGREPGRVPFLLEAQRGCY
IWHSTHHDAVTVEPLYENGTLCSQRAVLIAESTQPIRLSSIILAREIVTDHELRCDVKVD
VIDSIEIVSRTRELYVDDSPLELMVRALDAEGNTFSSLAGMMFEWSIAQDNDPAREEPSS
KIRILKFSEAEYSPPHYIAEMENEEKQGDVILVSGIRTGAAIVKVRIYEQFYKKVAAALI
RLLVLENIFLIPSHDIYLLVGAYIKYQVAKMVQGRMTEVKFPLEHYILQLQDHRFTRNGS
LSGKVALLDERTATVTALQLGQTNLVFVHKNVHMRSVSGLPNCTIYVVEPGFLGFTIYPG
DRWSLEVGQVYVITIEVFDRSSTKVYISDNLRITYGFLEEYFKEQLTTVNGSYHVVKALK
DGVVVINASLTSIVHQNNNIHPVKCIIKHQQEVKIYFPIKLTPNFLAFPHHPLGMLYRYK
VQKGIQRPGPMHCSSTHIAAKSLGHTLVIVSVTEYEEYLESSATFAAYEPLKALNPVEVA
LVTWQSVKEVVFEGGPRPWILEPSRFFLELSMERTEKIKVTEVRLPAKRKQNQYIYRILC
LDLGEQVLTFRIGNHPGVLNPSPAVEVVQVRFICAHPASMSVTPVYKVPAGAQPCPLPQH
NKQLIPVSSLRDTVLELAVFDQHRRKFDNFSSLMLEWKSSNETLAHFEDYKSMEMVAKDD
GSGQTRLHGHQILKVHQIKGTVLIGVNFVGYSEKKSPKDISNLPRSAAVELLLVDDVTVL
PENATIYNHPRVKEIFNLVEGSGYFLVNSSELDIVTITYMEAESSVQLVPVHPGFLTLEV
YDLCLAFLGPATAHLQVSDIQELELDLIDKVEIGKTVLVTVRVLDSSKRPFLNKYFRNME
LKLQLASAIVTLTLMEEQDEYSENYIVRAVTIGQTTLVAIARDKMGRKFTSAPRQIEVFP
PFRLVPEKMTLIPTNMMQVMSEGGPQPQSIIHFSISNQTVAVVNRRGQVTGKVVGTAVVH
GTIQTVNEDTGKVIVFSQDEVQIDVVQLRAVRILAAATRLITATEMPVYVMGVTSTQTPF
SFSNANPGLTFQWSMSKRDVLDLVPRHSEVFLQLPIENNFAMVVHTKAAGRTSIKVTVRC
VNSSSGQFEGNLSELSDEVQILVFEKLQLFSSECQPEQILMPMNSQLKLHTNRDDLLLIG
PGNRNYTYMAQAVNKGVTLVGLWDRRHPGMADYIPVAVEHAIEPDTKLTFVGDVICFSTH
LVNQHGEPGIWMISADSILQTDIVTGVGVARSPGTATIFHDIPGVVKTYREVVVNASSRL
TLSYDLKTHLTNTPNSTVFKLFITTGRNGINLKGSCTPNQALAITKVLLPETLMLCHVQF
SNTLLDIPASKVFHVHSDFSMEKGVYVCLIQVRPQSEELLQALSTAVTSVYGWATLVSER
SKNGMQRILIPFLPAFYINQSELVLRHKGDVGEIKVLGVDRVLENLEVFPSSPVLVISDH
SQSLLTPGLAVYPVRIVNFTAFQQMASPVFINISCVLTSQSEAVVVRAMKEKFGADQCEG
SGVFKRFIGSYQILLFTLFAVLASTAFIFLAYSAFLNKIQTVPVVYVPTIGTPQPGSYTS
ASSPPFLSPQPPLTQSRLQHWLWSIRH
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgataaacctcggagccacggtgctcatttgccgcgtgcctctcggtcgcctcctgtgc
ctgtcactggccttgtttgggaccctcgccaacaaacttaacgtgccgcaggtgttgctg
ccctttggccgggagccaggccgggtgcctttcctgctggaggcacagcggggctgctac
atctggcattccacccatcatgacgcagtaactgttgagcctttatatgaaaatggcacc
ttatgttcccaaagagctgtacttattgctgaatctacccaacccatacgcctcagcagt
attattcttgctcgagaaatagtgactgatcatgaactacgctgtgatgttaaggttgat
gtgatagacagcattgaaattgtatctcggacccgggaactctatgtagatgattcacct
ctggaactgatggtgagggcattggatgctgaaggaaatacttttagtagtttggcaggg
atgatgtttgagtggagcattgcccaggataacgacccagcaagagaggaaccgtctagc
aaaattaggattctgaaattctctgaagcagaatattctcctccacactatatagctgag
atggaaaatgaagagaaacaaggagatgtgattttggtgtctggaattaggactggtgct
gctattgtaaaagttagaatttatgaacaattctataagaaagtggcagcagcactgata
cgtctgcttgttttggaaaatatatttcttataccatcccatgatatttatctcttagta
ggagcatatattaaataccaagttgcaaaaatggttcagggaagaatgacagaggtgaaa
tttcccctggaacattatatactgcaattgcaagaccatagatttacacgtaatgggtct
ctttctgggaaagtggctttactggatgagagaacagccacagtgactgccctccaacta
ggccaaactaatcttgtctttgttcacaaaaatgtccatatgcgatctgtgtctggactc
ccaaattgcactatatatgttgtagagcctggatttttaggattcaccatctaccctgga
gaccgatggagtctagaggtgggacaggtgtatgttattacaatagaagtgtttgataga
agcagcacaaaggtctatatttcagataatctcaggattacatatggttttctagaggag
tactttaaagaacaactaaccactgtgaatggatcttaccatgtagtaaaagccttgaag
gatggtgtggtggtgataaatgcatccctgacttccatcgttcatcagaataacaatatt
catcctgtaaaatgtataataaaacaccagcaagaagtgaagatttattttcccatcaag
cttacacctaactttttggcatttcctcatcatcctctgggcatgttgtatcgttataaa
gtacagaaaggtattcaaagacctggaccaatgcactgttctagtacacatatagcagcc
aaatctttaggccatactctggtaatagtgagtgtgactgaatatgaagagtatttggag
agcagtgccacatttgctgcttatgagcccttaaaggccctaaaccctgtggaagtggca
ttggtgacatggcagtctgtgaaggaagtagtgtttgaaggggggcctcgtccgtggatc
ctggaaccctcccgtttttttttggagctgagcatggagaggacagagaagatcaaagtg
acagaagtccgactgccagccaagagaaagcagaaccagtacatataccggatcctgtgc
ctggatttaggggagcaagttctcacatttcgaattggaaatcacccaggagtcctgaac
cctagtccagctgtggaggttgtacaagtgcgcttcatatgtgcccatcctgccagtatg
tccgtaacaccagtatacaaggtgccagctggtgcccagccctgtcctctgcctcagcac
aacaaacaactgattcctgtatcaagcctgagggacacagttctggaactggcagtgttt
gatcaacacaggagaaagtttgataatttcagttcactaatgctagaatggaaatcttcc
aatgagacactagcccattttgaagattataagtcaatggagatggtagccaaagatgat
ggcagtgggcagacccggttacatggtcatcagatccttaaagtacatcagatcaaaggg
actgtactcattggagtcaattttgtgggctattcagagaagaaaagtccaaaagatatt
tccaacttgccaagatctgcagctgtggagctgctcctggtcgatgatgtaactgtgttg
ccagagaatgccaccatctataaccaccctcgtgtgaaggaaatatttaaccttgtggag
ggatctggttattttttagtcaacagcagtgaactggatattgtcaccatcacgtatatg
gaagcagaaagttctgtccagttagttccagtacatcctggatttctcaccttggaggtc
tatgatctgtgcttggctttcttgggtccagcaacagcccatctccaggtgtcagacata
caagagctggaacttgatctgatagataaggttgagataggcaaaactgtattggtgact
gtgagggttcttgactcttccaaacgcccattcctaaacaaatacttcagaaacatggag
ctcaaattgcagttggcatctgccattgtcaccctgacactaatggaggaacaggatgaa
tactctgaaaattatatagttcgggctgtcactattgggcaaaccacactcgtggctatt
gccagagacaagatggggagaaaattcacatcggctcctcgacaaattgaagtatttcct
ccattcagacttgttccagagaaaatgacactgattccaactaacatgatgcaggtaatg
tctgaaggtggccctcagccccaatctatcattcacttctccatcagtaatcagactgtg
gctgttgtcaataggagggggcaagttacagggaaagtggttggcacagctgtggtccat
ggcaccatccagacagtaaatgaagatactggcaaagtcattgtgttttcccaggatgaa
gtacagattgatgttgttcagctgagggctgttaggatccttgcagctgcaactagactc
atcacagctactgagatgccagtttatgttatgggcgtgaccagtacccagacccctttc
tccttcagcaatgccaaccctgggctcacattccagtggtccatgagcaaaagagatgta
ttggatctagtacccaggcattcagaggttttcctacagcttccaatagagaataacttt
gccatggtggtccacacgaaagcagctggcaggaccagtatcaaagtcactgttcgatgt
gtaaacagttcctctggacagtttgagggaaatttgtcagaactgtctgatgaagttcag
attctggtgtttgaaaaactccaacttttctcttcagagtgccaacctgagcagatttta
atgcctatgaattctcagctcaaactccataccaacagagatgacttgctacttattgga
ccagggaataggaactatacttatatggcccaggctgtaaataaaggggtgacccttgtg
ggactctgggaccggagacacccaggcatggcagactatattcctgttgctgtggagcat
gccattgagccagacaccaagcttacctttgttggggatgtcatctgcttcagcactcac
ctcgtcaaccagcatggtgaacctgggatatggatgatttctgctgacagtattctacag
acagacattgtcactggagtaggagtagccaggagtccaggaactgcaacgatttttcat
gacattccaggagtagtgaaaacataccgagaggtggtcgtcaacgcatcatcaagatta
actctcagttatgacctcaagactcatctcactaacacccctaattcaactgtattcaaa
cttttcatcaccactggcagaaatggtatcaatctcaaaggatcctgtactccaaatcag
gccttggccattacaaaagtacttcttccagagactctcatgctgtgccatgtacaattc
agtaatactttactagacattccagcaagtaaagtctttcatgtccattcagacttcagc
atggagaaaggggtttatgtctgcctaatccaggttagaccacagtcagaagagttgctt
caggccctcagcacggctgtcacctcagtctacgggtgggccacactggtcagtgaacgt
agcaagaatggaatgcaaagaatcctcattcctttccttccagccttttacatcaaccag
tcagaattggttctcagacacaaaggagacgttggggagattaaagtgctgggagttgac
agagttcttgagaacctagaggtcttccccagctccccagttctagtgatctctgatcat
agtcagtctctgctcacccctggcctggctgtctatcctgtaagaattgtcaactttact
gccttccagcagatggcatcacctgttttcattaatatttcctgtgtgctcaccagtcaa
agtgaggctgtggtagtgagagctatgaaggagaagtttggtgcagatcagtgtgaaggt
tcaggagtcttcaagcggttcattggttcttaccagatcctcctctttaccctctttgcg
gtgttggcatcaacagctttcatctttctagcatacagtgccttcctaaacaagattcag
accgttcctgtggtttatgtaccaactataggaacaccacagccaggttcttatacctcc
gcaagttctcctcctttcttgagcccacaacccccactgacccagagtcgactacagcat
tggttatggagcataaggcactaa
DBGET
integrated database retrieval system
