Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101975826
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Entry
101975826 CDS
T10664
Symbol
Cacna1f
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1F isoform X1
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04010
MAPK signaling pathway
iti04020
Calcium signaling pathway
iti04022
cGMP-PKG signaling pathway
iti04024
cAMP signaling pathway
iti04260
Cardiac muscle contraction
iti04261
Adrenergic signaling in cardiomyocytes
iti04270
Vascular smooth muscle contraction
iti04723
Retrograde endocannabinoid signaling
iti04725
Cholinergic synapse
iti04726
Serotonergic synapse
iti04727
GABAergic synapse
iti04911
Insulin secretion
iti04912
GnRH signaling pathway
iti04921
Oxytocin signaling pathway
iti04924
Renin secretion
iti04925
Aldosterone synthesis and secretion
iti04927
Cortisol synthesis and secretion
iti04929
GnRH secretion
iti04934
Cushing syndrome
iti04935
Growth hormone synthesis, secretion and action
iti05010
Alzheimer disease
iti05020
Prion disease
iti05022
Pathways of neurodegeneration - multiple diseases
iti05207
Chemical carcinogenesis - receptor activation
iti05410
Hypertrophic cardiomyopathy
iti05412
Arrhythmogenic right ventricular cardiomyopathy
iti05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101975826 (Cacna1f)
04020 Calcium signaling pathway
101975826 (Cacna1f)
04024 cAMP signaling pathway
101975826 (Cacna1f)
04022 cGMP-PKG signaling pathway
101975826 (Cacna1f)
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
101975826 (Cacna1f)
04929 GnRH secretion
101975826 (Cacna1f)
04912 GnRH signaling pathway
101975826 (Cacna1f)
04921 Oxytocin signaling pathway
101975826 (Cacna1f)
04935 Growth hormone synthesis, secretion and action
101975826 (Cacna1f)
04924 Renin secretion
101975826 (Cacna1f)
04925 Aldosterone synthesis and secretion
101975826 (Cacna1f)
04927 Cortisol synthesis and secretion
101975826 (Cacna1f)
09153 Circulatory system
04260 Cardiac muscle contraction
101975826 (Cacna1f)
04261 Adrenergic signaling in cardiomyocytes
101975826 (Cacna1f)
04270 Vascular smooth muscle contraction
101975826 (Cacna1f)
09156 Nervous system
04727 GABAergic synapse
101975826 (Cacna1f)
04725 Cholinergic synapse
101975826 (Cacna1f)
04726 Serotonergic synapse
101975826 (Cacna1f)
04723 Retrograde endocannabinoid signaling
101975826 (Cacna1f)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
101975826 (Cacna1f)
09164 Neurodegenerative disease
05010 Alzheimer disease
101975826 (Cacna1f)
05020 Prion disease
101975826 (Cacna1f)
05022 Pathways of neurodegeneration - multiple diseases
101975826 (Cacna1f)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
101975826 (Cacna1f)
05412 Arrhythmogenic right ventricular cardiomyopathy
101975826 (Cacna1f)
05414 Dilated cardiomyopathy
101975826 (Cacna1f)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
101975826 (Cacna1f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
iti04040
]
101975826 (Cacna1f)
Ion channels [BR:
iti04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101975826 (Cacna1f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
HemY_N
Motif
Other DBs
NCBI-GeneID:
101975826
NCBI-ProteinID:
XP_005338742
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Position
X
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AA seq
1979 aa
AA seq
DB search
MSESEVGKDTTPDPSPANGTGPGPDWGICPGPPVVEGDTGGASGLGTPRRKAQHNKHKTV
AVASAQRSPRALFCLTLANPLRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDS
NTANHNLEQVEYVFLVIFTVETVLKIVAYGLVLHPSAYIRNGWNLLDFIIVVVGLFSVLL
EQGSGRPGEAPHTKPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLHIAL
LVLFVIIIYAIIGLELFLGRMHKTCYFLGSDVEAEEDPSPCASSGSGRACTLNQTECRGR
WPGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMQDAMGHELPWLYFVSLVIFGSFF
VLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEEDLRGYLDWITQAEELDLEDPSAD
GNFGSMAEEGRAGNRPHLAELTNRRRGRLRWFRHSTRSTHSTSSHASLPASDTGSMAETP
ADEEEEEGALASCARCLNKIMKTSVCRRFRRANRGLRAHCRKAVKSNACYWAVLLLVFLN
TLTIASEHHGQPVWLTRIQEYANKVLLCLFTVEMLLKLYGLGPSVYVASFFNRFDCFVVC
GGILETTLVEVGAMQPLGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLL
LFLFIIIFSLLGMQLFGGKFNFDQTQTKRSTFDTFPQALLTVFQILTGEDWNVVMYDGIM
AYGGPFFPGMLVCVYFIILFICGNYILLNVFLAIAVDNLASGDAGTATDKSREKSSEESV
PKENGILVPGGENEEQEGTKTEEAGVEEEEEEDEEEEEEEEEEEAGAGHEELLQEVVPKE
KVMPIPEGSAFFCLSQTNPLRKACHTLIHHHIFTNLILVFIILSSVSLAAEDPIRAHSFR
NHILGYFDYAFTSIFTVEILLKMTVFGAFLHRGSFCRSWFNLLDLLVVSVSLISFGIHSS
AISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQ
LFKGKFYSCTDEAKHTPKECKGTFLVYPDGDVSRPLVRERLWVNSDFNFDNVLSAMMALF
TVSTFEGWPALLYKAIDAHAENRGPIYNYRVEISVFFIVYIIIIAFFMMNIFVGFVIITF
RAQGEQEYQNCELDKNQRQCVEYALKAQPLRRYIPKNPHQYRVWAAVNSAAFEYLMFLLI
LLNTVALAMQHYEQTAPFNYAMDILNMVFTGLFTIEMVLKIIAFKPKHYFTDAWNTFDAL
IVVGSVVDIAVTEVNNGGHLGESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTF
IKSFQALPYVALLIAMIFFIYAVIGMQMFGKVALQDGTQINRNNNFQTFPQAVLLLFRCA
TGEAWQEIMLASLPGSRCDPESDYGPGEEFTCGSNFAIAYFISFFMLCAFLIINLFVAVI
MDNFDYLTRDWSILGPHHLDEFKRIWSEYDPGAKGRIKHLDVVALLRRIQPPLGFGKLCP
HRVACKRLVAMNVPLNSDGTVTFNATLFALVRTSLKIKTEGNLEQANQELRMVIKKIWKR
IKQKLLDEIIPPPDEEEVTVGKFYATFLIQDYFRKFRRRKEKGLLGTEAPSSTSSVLQAG
LRSLQDLGPEIRQALTCDTDEEGEEEEEGQEGEEEAEKDPETYKAPMESQPPSRRNSRIS
VSLPVGSKNPDSLSLGPSDDDGRASNSRQPSVNPAGSHNQRRSSGVFMFTIPEEGSSQPK
ETKEQNKQVEEEEIPDRLSYLDEQREAPPHPALLPPHQPQRYVNGHNAPRRRLLPPTPAG
RKPSFTIQCLQRQGSCEDLPIPGTYHRGRNTGPSRAQGSWATPPQRGRLLYAPLLLVEEG
AAGEGYLGKSSGPLRTFTCLHVPGSRSDPSHGKRGSADSLVEAVLISEGLGLFARDPRFV
ALAKKEIADACRLTLDEMDSAASDLLAQGTSSLYSDEESILSRFDEEDLGDEMACVHAL
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatctgaagttggaaaagataccaccccagaccccagtccagccaatgggaca
ggccctggtcccgattgggggatttgtcctggacctccagtcgtggaaggtgataccggt
ggggcttcgggcctgggtacccctaggcgaaaggcccagcacaacaagcacaagacagtg
gcagtggccagtgcccagcggtcaccccgtgcgctattctgcctcaccctggccaatccc
cttcggcggtcctgcatcagcattgtggagtggaagccctttgacatcctcatcctgctg
acgatctttgccaactgcgtggccctgggagtctacatccccttccctgaggacgactcc
aacactgccaaccataacctggagcaggtggaatacgtatttctggtgattttcaccgtg
gagacagtgctcaagattgtggcctatgggctggtgctccaccccagcgcctacatccgc
aatggctggaacctcctggacttcatcatcgtcgtggtcgggctgttcagtgtgctactg
gagcagggatccgggcggccaggcgaagccccgcatacaaagccaggaggctttgatgtg
aaggcattgagggcgtttcgggtgctgcggccactgagactggtgtctggcgtccccagc
ctgcacatagtgctcaattcaatcatgaaggcgctggtgccgctgctgcacatcgcactg
cttgtgctcttcgtcattatcatttatgccatcatcggactggagctgtttcttggacgc
atgcataaaacctgctacttcctcggatctgatgtggaagcagaagaggacccgtcaccc
tgtgcatcttcaggctctgggcgtgcatgcactctgaaccagaccgagtgtcgaggacgc
tggccagggcccaatggtggcatcaccaactttgacaacttcttcttcgccatgctgaca
gtcttccaatgcatcaccatggaaggctggaccgatgtcctctactggatgcaggatgct
atggggcatgagctaccctggctgtacttcgtgagcctggtcatctttgggtccttcttc
gtcctcaaccttgtgcttggtgtcctgagtggggagttctccaaggagagagagaaggca
aaagcacgaggtgatttccagaagcttcgggagaagcagcagatggaagaggacttgcgg
ggttacctggattggattacacaggctgaggagctggatctcgaggacccctcggcagat
ggcaactttggttctatggctgaagagggccgggctggcaatcggccacatctggcagag
ctaaccaataggaggcgtggacgtctacgctggttcagacattccactcgctccacacac
tctaccagcagccatgccagcctcccagccagtgacactggctcaatggcagaaacccca
gctgatgaggaggaggaagaaggagctctggccagctgtgcacgctgcctaaacaagatc
atgaaaaccagcgtctgccgccgctttcgaagagccaaccgggggctccgagcacactgc
cggaaggctgtgaagtccaatgcctgctactgggctgtgctgctgctcgtcttcctcaac
acgctgacgatcgcctcagagcaccatggccagcctgtttggctcacccggatccaggag
tatgccaacaaagttctgctctgcctgttcactgtggagatgcttcttaagctgtatggt
ctgggcccctctgtctatgtcgcctccttcttcaaccgctttgactgctttgtggtctgt
gggggcatcctggagaccaccttggtggaagtgggtgccatgcagcctctcggcatctca
gtgcttcgatgtgtgcgtctcctcaggatctttaaggtcaccaggcactgggcatctctg
agcaacctggtggcatccctgctcaattccatgaaatctattgcatccttactgctgctc
ctcttcctctttatcatcatcttctccctgcttggcatgcagctgtttgggggcaagttc
aactttgaccagacccaaaccaagcggagcacctttgacaccttcccccaggcactgctc
actgtttttcagatcctgacaggtgaggactggaacgtggtcatgtatgatggtatcatg
gcgtatggtggccccttcttcccagggatgctggtgtgtgtctatttcatcatcctcttc
atctgcggcaactacatcctgttgaatgtgtttcttgccattgctgtggataacctggcc
agcggggatgcaggcactgccacggacaagagcagggagaagagcagtgaggagagtgtc
ccaaaagagaatggaatattggtgcctggtggagaaaatgaggaacaggaaggtacaaag
actgaagaagcaggcgtggaggaggaagaggaagaggatgaggaagaagaagaagaagaa
gaagaagaggaagcaggtgcagggcatgaggaactcctgcaggaagttgtacccaaggag
aaggtgatgcccatcccagaaggcagtgcattcttctgcctcagccaaaccaacccgctg
aggaaggcctgtcacaccctcatccaccatcatatcttcaccaatctgatcctggtattc
atcatcctcagcagtgtgtccctggccgctgaagaccccatccgtgcccactccttccgc
aaccacattctagggtacttcgattatgccttcacctccatttttactgtggagatttta
ctaaagatgacagtgtttggggccttcttgcaccgtggctccttctgccgtagctggttc
aatctgttggatctactggtggtcagtgtgtccctcatctcttttggcatccactccagc
gccatctccgtggtgaagattctgcgagtactccgggtactgaggcccctccgagccatc
aatagggccaagggactcaagcacgtggtacagtgtgtgtttgtggccatccggaccatc
gggaacatcatgattgtcaccacgctcctgcaattcatgttcgcctgcattggtgtgcag
ctcttcaagggaaaattctacagttgtaccgacgaggccaaacacacccccaaagaatgc
aagggcaccttcctggtctatcctgatggagatgtgtcacgacccctggtccgggagcgg
ctctgggtcaacagtgatttcaactttgacaatgtcctctcagccatgatggccctgttc
actgtctccacctttgaaggctggcctgcgctgctatataaggccatcgatgcacatgca
gaaaaccgaggccccatctataattaccgagtggagatctctgtgttcttcattgtctac
atcatcatcattgcattcttcatgatgaacatctttgtgggctttgtcattatcaccttc
cgtgcccagggcgagcaggagtatcaaaactgtgagctggacaagaatcagcgccagtgt
gtggagtacgccctcaaggcccagccactccgcagatacatccccaagaacccacatcag
tatcgcgtgtgggctgctgtgaactctgctgcctttgaatacctcatgttcctgctcatc
ctgctcaacacagttgccctagccatgcagcactatgagcagactgctcccttcaactat
gcgatggatatcctcaacatggtgttcactggactcttcactatcgagatggtgctcaaa
atcatcgccttcaaaccaaagcattactttactgacgcctggaacacatttgatgctctt
attgtggtgggcagcgtcgtggacatcgccgtcactgaagtcaataatggtggccatctt
ggtgagagctctgaagacagctctcgcatctccatcaccttctttcgcctcttccgagtc
atgcgactggtcaagctcctcagtaagggtgaagggatccgcacattgctctggacattc
atcaaatccttccaggccttgccctatgtggctcttctcatagcaatgatattcttcatc
tatgcagtcattggcatgcagatgtttggcaaggtggctcttcaggatggcacgcaaatc
aatcgaaacaacaacttccagacatttccacaggctgtactgcttctgttcaggtgtgcc
actggtgaggcatggcaggaaataatgcttgccagccttcctggaagtcggtgtgaccct
gaatctgactatggccctggcgaggagtttacctgtggtagcaattttgccatagcctat
tttatcagcttcttcatgctctgtgccttcctgatcataaatctctttgtggctgtgatt
atggacaactttgattatctaaccagagattggtccatcctgggccctcatcatcttgat
gaattcaagaggatctggtctgaatatgaccctggggccaagggccgcatcaagcacctg
gatgtggttgccctgctgagacgcatccagcccccactaggatttgggaagctgtgccca
catcgcgtggcctgcaagagacttgtggcaatgaacgtgcccctaaattcagatgggaca
gtgacattcaatgccacactctttgccctggtgcggacatccctgaagatcaagacagaa
gggaacttggagcaagccaaccaggaactgcggatggtcatcaaaaagatctggaagcgg
ataaagcagaagctattggatgaaatcattccccctccagatgaggaggaagtcaccgtg
ggcaaattctatgccacattcctgatccaagattatttccgcaaattccggaggaggaaa
gaaaaggggctattaggaactgaggccccctccagcacctcctctgtccttcaggctggt
ctgaggagcctacaggacttgggtcctgagatccggcaggccctcacatgtgacacagat
gaggaaggggaggaggaggaagaggggcaggaaggagaggaagaagctgaaaaggaccca
gaaacatacaaagcccccatggagtcccagcccccatctcgtaggaattccagaatttct
gtgtctctgcctgttggaagcaaaaacccagattcactttcccttgggcccagtgatgat
gatgggagggcttccaattccagacagcccagtgtgaacccagctggatcccacaaccaa
aggagaagctctggggttttcatgttcaccatcccagaagaaggaagttctcagcccaag
gaaactaaagagcaaaacaagcaagttgaggaagaggaaatccctgaccggctctcttat
ctggatgagcagagagaggctcccccgcacccagcccttttgccacctcaccaaccccag
agatatgtaaatgggcacaatgcaccacgcagacgtctgctgccccccactcctgcaggc
cggaagccctccttcaccatccagtgtctgcagcgccaaggcagttgtgaagacttaccc
atcccaggcacctatcatcgggggcgaaacacagggcccagcagggctcagggttcctgg
gcaacccctcctcagaggggtcggctcctatacgccccactgctgttggtggaggagggt
gcagcaggggagggatacctcggcaaatccagcggtccactgcgtacctttacctgtctg
catgtgcctggatctcgctcggaccccagccatggcaagagaggcagtgctgacagtttg
gtggaggctgtactcatctctgaaggcctaggcctctttgcccgagacccacgttttgtg
gcccttgccaagaaggagatcgcagatgcatgtcgcctgacgctggatgaaatggacagt
gctgctagtgacctgttggcacaggggaccagctcactgtatagtgatgaggagtccatc
ctctcccgctttgatgaggaggacctgggagatgaaatggcctgtgtccatgccctctga
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integrated database retrieval system
