Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101976299
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Entry
101976299 CDS
T10664
Symbol
Extl1
Name
(RefSeq) exostosin-like 1
KO
K02368
alpha-1,4-N-acetylglucosaminyltransferase EXTL1 [EC:
2.4.1.224
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
iti01100
Metabolic pathways
Module
iti_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
101976299 (Extl1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
iti01003
]
101976299 (Extl1)
Enzymes [BR:
iti01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
101976299 (Extl1)
Glycosyltransferases [BR:
iti01003
]
Glycan extension
O-Glycan
101976299 (Extl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
Motif
Other DBs
NCBI-GeneID:
101976299
NCBI-ProteinID:
XP_005317686
UniProt:
I3NCA2
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MQSLRRKSLWVALSASWLLLILLGVFPLLRPAVPPRPQPGASPGWPRWLDAELLQSFSQP
EEPTEDAPPCPRSPHGGHCTWGTCFDTSRCRDGLKVFVYPAAGPTSEMHHRVTASLEGSR
YGTSSPAEACLLLFLSLDTPAGGCSPEPPHWNSGRNHLVLSLHLAPCPWASQLGRAMVAE
ASPKVDTFRPGFDVALPLLPEAHPLRGRAPGQLWQHSPQPGLALLAVAEKMGRWRPADVH
SPPVGWDRHCEQDSGAEPTLPGERPPNATFCLIPGHRTEAWRFLQALQAGCIPVLLSPCW
ELPFSEVIDWTKAAIIVDDRLPLQVLAALQEMSPARVLTLRQQTQFLWDAYFSSVEKVIW
TTLEIIQDRFFGAPTHPSLLWNSPPGALLARPTFSLSPQEFPFYHLQLGSRPEGRFSTLI
WVGPPGQAPLKLIQAVAGSQHCAQILVLWSSDRPVPSRWPETAVPLTVIEGRRKVSDRFF
PYSAIGTDAILSLDAHTNLSTSEVDFAFSVWQSFPERMVGFLTCSHFWDEARGGWGYTAE
MANEFSMVLSTAAFYHRYYHTLFTHSLPKALRTLADEAPTCVDVLMNFLVAAVTKLPPIK
VPYGKQPLGAAALAPGGPGPEPQPSAPNCINQMAAEFGHMPLVSSRVRLDPVLFKDPVSV
QRKKYRSLEKP
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccctgaggagaaagtctctctgggtggcactgtcagcctcctggctccttctc
atcctcctgggggtcttcccccttctccgcccagcagtgccgcccaggcctcagccaggg
gcctccccaggctggccccgctggctggatgcagaacttctgcagagcttctcccagcct
gaggagcctacagaagatgcccctccgtgtcctagatccccccacggtggccactgtacc
tggggaacctgctttgacacctcgaggtgcagagatggcctcaaggtgttcgtgtaccca
gcggctggaccgacctccgagatgcatcaccgggtcacggcctccctggaaggctcccgc
tatggcacctccagccccgcggaggcctgcctcctcctcttcctcagcttggacacccca
gctggaggctgcagcccggagcctccacactggaactcaggcagaaaccacctggtcctc
agcctccacttggccccttgcccctgggcctctcagctgggacgggcgatggtggctgag
gccagccccaaggtggacaccttccgtcctggctttgatgtggctctcccgcttctcccc
gaagctcacccgctgcgaggcagggctcctggccagctgtggcagcacagcccccagccc
gggctagccctgctggccgtggcagagaagatgggcaggtggcgcccggcagatgtccac
tcccctcctgttggctgggacaggcactgtgagcaggactctggagctgagccgacactc
ccaggggaaaggccacccaacgccacgttctgcctcatccctggccaccgtactgaagcc
tggcgctttctccaagccctgcaggctggctgcattcctgtgcttctcagtccctgctgg
gagctgcccttctctgaagtcattgactggaccaaggccgccattatagtcgatgacagg
ctcccgcttcaggtcctggctgccctccaggagatgtcccctgcacgggtcctcaccctg
cgccagcagacccagtttctgtgggatgcctacttctcctcagtggagaaggtcatctgg
accaccctggagattattcaggaccggttctttggagcacccactcacccctctctcttg
tggaacagccctccaggggcactcctggcccgacctaccttttccctgagccctcaggag
tttcccttctaccacctgcaactaggctctcgccccgagggcagattcagcaccctgatc
tgggtgggcccccctggccaggcccccctgaagctcatccaggctgtggcaggctcccag
cactgcgcccagatcctggttctctggagcagtgacaggccagttccatccaggtggccc
gagacagctgtgcccttgacggtcattgaggggcgcagaaaggtcagtgaccgcttcttc
ccgtacagcgccatcggcacggacgccatcctcagcctcgatgcccacaccaatctttcc
acaagtgaggtggactttgccttttcggtgtggcagagcttcccagagcggatggtgggt
tttctgacatgcagccacttctgggacgaggccaggggtggctggggctacactgctgag
atggccaacgagttctccatggttctcagcacagctgccttctaccacaggtattaccac
accctcttcacccactccctgcccaaggctctgaggaccctggcagatgaggcacccacc
tgtgtagacgtcctaatgaacttcctagtagcagcagtcaccaagctgccccctatcaag
gtgccctatggcaagcagcctctgggagctgctgcactggctcctgggggtcctgggcca
gagccccagccctccgccccgaactgcatcaaccagatggcggcagagttcggccacatg
cccctggtatcttctcgcgtccgtctggacccagtgctgttcaaggacccggtgtctgtg
cagcgaaagaagtaccgcagtctggagaaaccctag
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