Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101977194
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Entry
101977194 CDS
T10664
Symbol
Pkp1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
Cytoskeleton proteins [BR:
iti04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
101977194 (Pkp1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101977194
NCBI-ProteinID:
XP_005330424
UniProt:
I3MJV7
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Position
Unknown
AA seq
727 aa
AA seq
DB search
MNHSPLKTALAYECFQDQDNSTLALPSDQKMKTGTSGRQRVQEQVMMTVKRQKSKSSQSS
TLSHSNRGSMYDGLTDNYNNYGTTSRSSYYSKFQAGNGSWGYPIYNGTLKREQDNRRFSS
YSQMENWNRHYPRGSCTTTGAGSDICFMQKIKASRSEPDLYCDPRGTLRKGTLGSKGHKT
TQNRYSFYSTCSGQKAIKKCPGRPPSCTSKQDPVYVPPISCNKDLSFGHSRASSKICSED
IECSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP
NQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVNLLRKTGSTEIQKQLTGLLWNLSS
TDELKEELVADALPVLADRVIIPFSGWCDGNSNMSREMVDPEVFFNATGCLRNLSSADAG
RQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCILHNLSYRLDAEVPTRYRQLEYN
TRNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSSWLYHSDAIRTYLNLMGKSK
KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLS
NMSRHPMLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILTSACYTVRNLMTSQPQMAKQYF
SSSMLNNIINLCRSSASPKASEAARLLLSDMWSSKELQGVLRQQGFDRNMLGALAGPNSF
RNFTSRF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactccccgctcaagacagccctggcatacgaatgcttccaggaccaggacaac
tccacgctggctttgccgtcggaccaaaagatgaagacgggcacctcaggcaggcagcgc
gtgcaggagcaggtgatgatgaccgtcaagcggcagaaatccaagtcttcccagtcgtcc
accctgagccactccaaccgaggttccatgtacgatggcttgactgacaactacaacaac
tatgggaccaccagccggagcagctactactccaagttccaggcaggaaatggctcgtgg
ggctatccaatctacaatgggaccctcaagcgggagcaggacaacaggcgcttcagctcc
tacagtcagatggagaactggaaccggcactacccccgcgggagctgtaccaccaccggt
gcaggcagtgacatctgcttcatgcagaaaatcaaggcgagccgcagcgagcctgacctc
tactgcgatcccaggggcaccctgcgcaagggcacgctgggcagcaagggccacaagacc
acccagaaccgctacagcttttacagcacctgcagcggtcaaaaggccatcaagaagtgc
cccgggcgcccaccctcttgcacctccaagcaggacccagtctatgtgccacccatctcc
tgcaacaaggacctgtcctttggccactcaagggctagctccaagatctgcagtgaggac
atcgagtgcagtgggctgaccatccccaaggctgtgcagtacctgagctcccaggacgaa
aagtaccaggccatcggggcctactacatccagcacacctgcttccaggatgaatctgcc
aagcaacaggtctatcagttgggaggcatctgcaagctggtggaccttctccgcagcccc
aaccagaatgtccagcaggctgctgcgggggccctgcgcaacctggtgttccgcagcacc
accaacaagctggagacccggaggcagaatggaatccgtgaagccgtcaacctcctgagg
aagacggggagcaccgagatccagaaacaactgactgggctgctctggaacctgtcttcc
actgatgagctgaaggaggagctggtggccgacgctctgcctgtgctggccgaccgggtc
atcatccctttctcgggctggtgtgatggcaacagcaacatgtcccgagaaatggtggat
cccgaggtcttcttcaatgccacgggctgcttgaggaacctgagctctgcagacgcaggc
cgccagaccatgcggaactactcggggctcatcgactccctcatggcctacgtccagaat
tgtgtggcagctagccgctgtgatgacaagtccgtggagaactgcatgtgcatcctgcac
aacctctcctaccgcctggatgccgaggtgcccacccgctaccgccagctggagtataac
acccgcaacgcctacacggagaagtcctccaccggctgcttcagcaacaagagcgacaag
atgatgaacaacaactatgactgtccccttcctgaagaagaaaccaatcccaagggcagc
agctggctctaccactcggatgccattcgcacctacctgaacctcatgggcaaaagcaag
aaagatgccaccctggaggcctgcgcgggtgccctgcagaacctgacggccagcaagggg
ctgatgtccagtggcatgagccagttgattgggctgaaggaaaagggcttaccacaaatc
gcccgcctcctgcaatctggcaactcagatgtggtccgctccggggcctccctcctgagc
aacatgtcccgccatcccatgctgcacagagtgatggggaaccaagtgttcccagaggtg
accaggctcctcaccagccatactggcaacaccagcaattccgaagacatcttgacctca
gcctgctacaccgtgaggaacctgatgacctcacagccccagatggccaagcagtacttc
tccagcagcatgctcaacaacatcatcaacctgtgccgcagcagtgcctcacccaaggct
tcagaggctgcccggctcctcctctctgacatgtggtccagcaaggagctgcagggtgtc
ctcagacagcaaggcttcgataggaacatgctgggagccctagccgggcccaatagcttc
aggaacttcacctcccgattctaa
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