Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101977199
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Entry
101977199 CDS
T10664
Symbol
Setdb1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00310
Lysine degradation
iti01100
Metabolic pathways
iti04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
101977199 (Setdb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101977199 (Setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
iti03036
]
101977199 (Setdb1)
Enzymes [BR:
iti01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
101977199 (Setdb1)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
101977199 (Setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
101977199 (Setdb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
101977199
NCBI-ProteinID:
XP_005331235
UniProt:
I3M8I9
LinkDB
All DBs
Position
Unknown
AA seq
1317 aa
AA seq
DB search
MSSLPGCIGLDAATAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMECVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDETSQPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMCGELSKDGDLVVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPMESPQPTVPPAPAAPSAPPAPPLSPQAGDNES
LESQLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPVLSESAPGGKPGINQTYRSPLGSTTS
APAPPAPPALPGPSAPPGPPAPPGPPAPPGPPAPPAFHGMLERAPAEPSYRAPMEKLFYL
PHVCSYTCLSRIRPIRNEQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLC
LRTMQEIERYLFETGCDFLFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCV
NEIDTTPPPQVAYSKERIPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACT
PGGQVNPNSGYQYKRLEECLPTGVYECNKRCKCDPHMCTNRLVQHGLQVRLQLFKTQNKG
WGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDV
PCSSDSSGVDLKDQEDGNSGTEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQ
KENGLSETASKDSRPPDLGPPHLPIPSSVPVGGCNPPSSEETPKNKVASWLSCNSVSEGG
FGDSDSRSSFKTSEGGEGRAGGSRGEAEKASTSGMAIKDEGDIKQAKKEDPDDRNKMSLV
TETSRNYGYNPSPVKPEGLRRPPSKTSMHQSRRLMASAQSNPDDILTLSSSTESEGESGT
SRKPTPGQTSATAVDSDDIQTISSGSEGDDFEDKKNMSGPTKRQVAVKSTRGFALKSTHG
IAIKSTNMASVDKGESAPVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQN
VFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgtattggtctggatgcagcaacagctgcagtggaatctgaa
gagattgcagaactacaacaggcagtggttgaggagcttggtatctctatggaggaactt
cgacagttcattgatgaagaattggaaaagatggaatgcgtacaacagcgcaagaaacag
ctagcagagttggagacgtgggtaatacagaaagaatccgaagtggctcatgttgaccaa
ctctttgatgatgcatccagggcagtgactaattgtgagtctttggtgaaggacttctac
tccaagctgggactacagtacagggacagtagctctgaggatgaaacttcccagcctaca
gagataattgagattcctgatgaagatgatgatgttctcagcattgattcaggtgatgcg
ggcagcagaactccaaaagaccagaagctccgtgaggctatggccgccttaagaaaatca
gcacaagatgtccagaagttcatggatgctgtcaataagaagagcagttcccaggattta
cataaaggaaccttgagtcagatgtgtggagaactgagcaaagacggagacctggtagtc
agcatgcggattcttggcaagaagagaactaagacgtggcacaaaggcacccttatcgcc
atacagacagttgggccagggaagaaatacaaggtgaaatttgacaacaaaggaaagagt
ctgctttcagggaaccatattgcttatgattaccaccctcctgctgacaaattatatgtg
ggtagtcgagtggtggccaaatacaaagatgggaatcaggtctggctctatgctggcatt
gtggctgagacaccaaatgtcaaaaacaagctcaggtttcttattttctttgatgatggc
tacgcttcctatgtcacacagtcagaactctatcccatttgccggccattgaaaaagact
tgggaggacattgaagacatctcctgccgagacttcatagaggagtatatcactgcttac
cccaaccgacccatggtgctgcttaagagcggccagcttatcaagaccgagtgggaaggc
acatggtggaagtcccgagttgaggaggtggatggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgagtggatctatcgaggttctacacggctggagcccatgttcagc
atgaaaacgtcttcagcttctgcactggagaagaagcaagggggacagctcagaacacgt
ccaaatatgggtgctgtgaggagcaaaggccctgttgtccagtacacacaggatctgaca
agtactggaactcagttcaaaccaatggagtccccacagcctacagttccacctgccccc
gctgccccctctgccccacctgctcctcctctgtccccccaagcaggtgacaatgaaagc
ttggaaagccagcttgctcagtcacggaagcaggtagccaaaaagagcacatccttccga
ccaggatctgtgggctctggtcattcctcccctacgtctcctgtactcagtgaaagtgcc
cctggtgggaaacctgggatcaatcagacttatagatcaccattaggctcaacaacctct
gccccagcaccccctgctcctccggcccttccaggtccttcagcccctcctggtcctccg
gcccctcctggtcctccggcccctcctggtcctccagcccctccagccttccatggcatg
ctggagcgggccccagcagagccctcctaccgtgcccccatggagaagctcttctactta
cctcatgtctgcagctatacttgcctgtctcggatcagacctataaggaatgaacagtat
cgggggaagaaccctctgttagtcccactgctgtatgacttccggcggatgacagcccgg
cgtcgagttaatcggaagatgggttttcatgttatttataagacaccttgtggcctctgt
cttcggacaatgcaggagattgaacgttatctttttgagactggatgtgacttccttttt
ctggagatgttctgtttggatccgtatgttcttgtggatcgaaagtttcagccctacaag
cctttttactatattttagacatcacttatggaaaggaagatgttcccctctcctgtgtc
aatgaaattgacacaactcccccaccccaggtggcctatagcaaggaacggatcccaggc
aagggtgttttcattaacacaggccctgaatttcttgttggctgtgactgcaaggatggt
tgtcgtgacaagtccaagtgtgcctgccatcagctgactatccaggctacggcctgcacc
cctggaggtcaagtcaaccctaactctggctaccagtacaagagactagaagagtgtctg
cccacaggggtatatgaatgtaacaaacgctgtaaatgtgacccacacatgtgcacaaat
cgattagtgcagcatggactacaggttcggctacagctattcaagacacagaacaagggc
tggggtatccgctgcttggatgacattgccaaaggctcttttgtttgtatttatgcaggc
aaaatcctgacagatgactttgctgacaaggagggcctggaaatgggtgacgagtacttt
gcaaatctggaccatattgagagcgtagagaatttcaaggaaggatatgagagtgatgtc
ccctgttcctctgatagcagtggtgtagatttgaaggaccaagaagatggcaacagtggt
acagaggaccctgaagagtccaatgatgatagctcagatgataacttctgtaaggacgag
gacttcagcaccagctcagtttggcgcagctatgctacccggaggcagacccgtggtcag
aaagagaatggattgtctgagacagcttccaaggattctcgccccccagatcttgggccc
ccacatcttcctatcccttcctcagtccctgtagggggctgtaatccaccttcctccgaa
gagacgcccaagaacaaagtggcctcatggttaagctgcaatagtgtcagtgaaggtggt
tttggtgactctgatagtcgttcatccttcaagactagtgaaggtggggagggcagggct
gggggaagtcgaggggaggctgagaaggcctctacctcgggaatggccatcaaggatgaa
ggagacatcaagcaggctaagaaagaggaccctgatgaccggaacaagatgtccttagtt
actgaaacctctcgaaattatggttacaatccttctcctgtgaagcctgaaggacttcgc
cgtccacctagtaagactagtatgcatcagagccggcgactcatggcttctgcccagtcc
aaccctgatgacatcctgacactgtccagcagcacagaaagtgagggggaaagtgggacc
agccgaaagcctactcctggtcagacttcagccacagcagttgacagtgatgatatccag
accatctcctctggctctgaaggggatgactttgaggacaagaagaacatgtctggtccg
acaaagcgccaggtggcagtaaaatcaacccggggctttgctcttaaatcaacccatggg
atagccattaaatcaaccaacatggcctctgtggacaagggggagagtgcacctgttcgg
aagaatacacgccagttctacgatggtgaagagtcttgctatatcatcgatgccaagctt
gaaggcaacttgggccgctacctcaatcatagttgcagccccaacctgtttgttcagaat
gtctttgtggatacccatgatcttcgcttcccttgggtggccttctttgccagcaagaga
atccgggctggaacagaacttacttgggactacaactatgaggtgggcagtgtggaaggc
aaggagctgctctgctgctgtggggccatcgaatgcagagggcgtcttctttag
DBGET
integrated database retrieval system
