Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101978094
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Entry
101978094 CDS
T10664
Symbol
Trpc5
Name
(RefSeq) short transient receptor potential channel 5 isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04360
Axon guidance
iti04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
101978094 (Trpc5)
09158 Development and regeneration
04360 Axon guidance
101978094 (Trpc5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
iti01009
]
101978094 (Trpc5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
iti04040
]
101978094 (Trpc5)
Protein phosphatases and associated proteins [BR:
iti01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101978094 (Trpc5)
Ion channels [BR:
iti04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101978094 (Trpc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
LEH
Motif
Other DBs
NCBI-GeneID:
101978094
NCBI-ProteinID:
XP_005323397
UniProt:
I3LYD3
LinkDB
All DBs
Position
X
Genome browser
AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHPRRSFSTSSTEFSQ
RDDTNDGCGGARAKSKSVSFNLGCKKKACHGPPLIRTMPRASGSQGKSKAESSSKRSFMG
PSLKKLGLLFSKFNGHMSEPSSEPMYTISDGIVQQHYMWQDIRYSQMEKGKAEACSQSEI
NLSEVELGEVQGAAQSSECPLACSSSLHCASSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctatactacaagaaggtcaattattcaccatatagagaccgcatccccctg
caaattgtgagggctgagacggagctctctgccgaggagaaagccttcctcaatgctgtg
gagaagggggactatgccactgtgaagcaggcactacaagaggccgagatctactataat
gtcaacatcaactgcatggatcctctgggccggagtgccctgctcattgctattgagaat
gagaacctggagatcatggagctactgctgaaccacagcgtgtatgtgggtgatgcatta
ctctatgccatccgcaaggaagtggtgggtgctgtggagcttctgctcagctacaggaag
cccagtggagagaaacaggtccccacactgatgatggacacccagttctctgagttcaca
ccagacatcactcccattatgctggctgcccacaccaacaactatgaaatcatcaaattg
cttgtccaaaaacgggtcacgatccctcggccccaccagatccgctgcaactgtgtggaa
tgtgtgtccagttcagaggtagatagcctgcgccattcccgctccagactgaacatttat
aaggctctggcaagtccctcactcattgccttatcaagtgaggaccccatccttactgcc
ttccgtctgggctgggagctcaaggagctcagcaaggtggagaatgagttcaaggcagag
tatgaagagctctcccagcagtgcaagctctttgccaaagatctgctggaccaagctcgt
agctcccgggaactggagatcatcctcaaccatcgagatgaccacagtgaagagcttgat
cctcagaagtaccatgacctggccaagctgaaggtggcgatcaaataccaccagaaagag
tttgttgctcagcccaactgccaacagttgcttgccaccctgtggtatgatggtttccct
ggatggcggcggaaacactgggtagtcaagctcctgacctgcatgaccattgggttcctg
tttcccatgctgtctatagcctatctgatctcacctaggagcaaccttgggttgttcatc
aagaaaccctttatcaagttcatctgccacacagcgtcctatttgaccttcctcttcatg
cttctcctggcttctcagcacattgttcggacagacctccatgtacaggggcctcctcca
actgttgtggaatggatgatattgccttgggttctaggtttcatttggggggagattaag
gaaatgtgggatggtggatttactgaatacatccatgattggtggaacctgatggatttt
gcaatgaactccctctacttggcaactatttctttgaagattgtggcctatgtcaagtat
aatggttctcgtccgagggaggaatgggaaatgtggcacccgactctgattgcagaggcg
ctcttcgcaatatccaacattttaagttccttgcgtctcatatccctgttcacagccaac
tcccacttagggcctctgcagatctctttgggacgcatgctgcttgatatcctcaaattc
ctctttatctactgcctggtattgctggcttttgccaatggactgaatcagctttacttt
tattatgagaccagagctattgatgagcctaacaactgcaaggggatccgatgtgaaaag
cagaacaacgccttctccacgctctttgaaacacttcagtcactcttctggtctgtattt
ggccttttaaatctctatgtcaccaatgtgaaagccagacatgagttcaccgagtttgta
ggagctaccatgtttggaacatacaatgtcatctccctggtagtgctgctgaacatgctg
attgccatgatgaacaactcctaccagcttattgccgatcatgctgatattgagtggaag
tttgcaaggacaaagctctggatgagttactttgatgaaggtggcaccttaccacctcct
tttaacatcatccccagccccaaatcatttctctatcttggtaactggttcaacaatacc
ttctgccccaaaagagaccctgatggtagacgaagaagacacaacttgagaagcttcaca
gaacgccatgctgacagcctgatacaaaatcaacactatcaggaagttatcaggaattta
gtcaaaagatatgtggctgctatgataagaaattccaaaacaaatgaggggctaacagaa
gaaaattttaaggaattaaagcaggacatctccagcttcagatatgaagtgcttgacctc
ttaggaaacagaaaacacccaaggagaagcttttccacaagcagcactgaattctctcag
agggatgacaccaatgatggctgtggtggggctcgggccaaatccaagagcgtctcattc
aatttaggctgcaagaaaaaggcctgccatgggccacctctcatcagaaccatgccaaga
gccagtggttcccaggggaagtcaaaagctgagtcatcaagcaaacgctccttcatgggt
ccttctctcaagaaactgggtcttcttttctcaaagtttaatggtcatatgtctgaaccc
agttcagagccaatgtacacaatttctgatggaatcgtccagcagcattatatgtggcag
gacatcagatattctcagatggagaaagggaaagcagaagcctgttctcaaagtgaaatt
aacctcagtgaggtagaattaggtgaagtccagggtgctgctcagagcagtgaatgccct
ctagcctgttccagctctcttcactgtgcatccagcatctgctcctcaaattctaaactt
ttagactcctccgaggatgtatttgaaacttggggagaggcctgtgacttgctcatgcac
aaatggggtgatggacaggaagaacaagttacaactcggctctaa
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