KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101978293
Entry
101978293         CDS       T10664                                 
Symbol
Trex1
Name
(RefSeq) three-prime repair exonuclease 1 isoform X2
  KO
K10790  three prime repair exonuclease 1 [EC:3.1.11.2]
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:iti00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    101978293 (Trex1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:iti03400]
    101978293 (Trex1)
Enzymes [BR:iti01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     101978293 (Trex1)
DNA repair and recombination proteins [BR:iti03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    101978293 (Trex1)
SSDB
Motif
Pfam: RNase_H_2 RNase_T
Other DBs
NCBI-GeneID: 101978293
NCBI-ProteinID: XP_005326927
LinkDB
Position
Unknown
AA seq 314 aa
MGSQAPPPGPMQTLIFLDLEATGLPFSQPKVTELCLLAVHRCALENTLTSQGSPPTVPLP
PRVADKLSLCVAPGKACSPAASEITGLSTAVLAAHGRQRFDNNLANLLQAFLQRQPQPWC
LVAHNGDRYDFPLLQAELAMLGLASILDGAFCVDSIAALKALEQASNPSEHGPRKSYSLG
SIYTRLYGQAPVDSHTAEGDVLALLSICQWKPKALLQWVDTHAKPFHTIRPMYGVTASSG
TNPKRSAVTATTPLATTKNASPSIGESRRPKAITSTVVPGIPPREGLLAPLGLLAFLTLA
IATLYGLSLATPGQ
NT seq 945 nt   +upstreamnt  +downstreamnt
atgggctcacaggccccacctcctggtcccatgcagaccctcatcttcttggacctggag
gccactggcctgccgttctcccaacccaaggtcacggagctgtgcctgctggctgtccac
agatgtgccctggagaatactctcacctctcaagggtcaccacccacagtgcccctgcca
ccacgcgtggcagacaagctttcactgtgcgtggctcctggaaaagcctgcagtcctgca
gccagcgagatcacaggtctgagcacagctgtgctcgcagcacatgggcgtcaacgcttt
gataacaacctggccaacctgctccaagccttcctgcagcgccagccacagccttggtgc
ctggtggcacacaacggtgaccgctacgacttccccctgctccaggcagagttggctatg
ctgggtcttgccagtattttggatggtgctttctgtgtggacagcattgctgccctgaag
gccttggaacaagctagcaacccctcagagcatggcccaaggaagagctacagcctgggc
agtatctatacccgcctatatgggcaggccccagtggactcacacacggctgagggtgat
gttttagctctgcttagcatatgtcagtggaagccaaaggccctgctgcagtgggtggat
actcacgccaagccctttcacaccatcaggcccatgtatggggtcacagcctcttctggg
accaacccaaaacggtctgcagtcacagccactacacccttagccactaccaagaatgct
agccccagcattggtgaaagcagaagacccaaggctattacttcaacagtagtccctgga
atcccaccccgggaggggctgctggcccctctgggcctgctggccttcctcaccttggcg
atagccacattgtatggactatccctggccacacctgggcagtaa

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