Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101978664
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Entry
101978664 CDS
T10664
Symbol
Otof
Name
(RefSeq) otoferlin isoform X3
KO
K19949
otoferlin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
Membrane trafficking [BR:
iti04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101978664 (Otof)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101978664
NCBI-ProteinID:
XP_005322619
UniProt:
A0A287D097
LinkDB
All DBs
Position
Unknown
AA seq
1995 aa
AA seq
DB search
MALLVHLKTVSELRGRGDRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASNIDRTE
MLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENHVEVTETLIDDNNAIIKTSLCVEVRYQA
TDGQVGSWDDGDFLGDESLQEEEKDSQETDGLLPGSRPSSRPPGEKSFRSKGREKTKGGR
DGEHKAGRSVFSAMKLGKNRPHKEDPQRQDEPAVLEMEDLDHLAIRLGDGLDPDSVSLAS
VTALTTNVSNKRSKPDIKMEPSAGRPMDYQVSITVIEARQLVGLNMDPVVCVEVGDDKKY
TSMKESTNCPYYNEYFVFDFHVSPDIMFDKILKISVIHSKNLLRSGTLVGSFKMDVGTVY
AQPEHQFYHKWAILSDPDDISAGLKGYVKCDVAVVGKGDNIKTPHKANETEEDDIEGNLL
LPEGVPAERQWARFYVKIYRAEGLPRMNTSLMANVKKAFIGENKDLVDPYVQVFFAGQKG
KTSVQKSSYEPLWNEQVIFTDLFPPLCKRMKVQIRDSDKVNDVAIGTHFIDLRKISNDGD
RGFLPTLGPAWVNMYGSTRNYTLLDEHQDLNEGLGEGVSFRARLMLALAVEILDTSNPEL
TSSTEVQVEQATPVSESCTGKMEEFFLFGAFLEASMIDRKNGDKPITFEVTIGNYGNEVD
GLSRPQRPRPRKEPGNEEEVDLIQNSSDDEGDDGGDLASVSSTPPMRPQITDRNYFHLPY
LERKPCIYIKSWWPDQRRRLYNANIMDHIADKLEEGLNDVQEMIKTEKSYPERRLRGVLE
ELSCGCHRFLSLADKDQGHSSCTRLDRERLKSCMRELESMGQQARSLRAQVKRHTVRDKL
RLCQNFLQKLRFLADEPQHSIPDVFIWMMSSNKRVAYARVPSKDLLFSIVEEELGKDCAK
VKTLFLKLPGKRGFGSAGWTVQAKLELYLWLGLSKQRKDFLCGLPCGFEEVKAAQGLGLH
SFPPISLVYTKKQAFQLRAHMYQARSLFAADSSGLSDPFARVFFINQSQCTEVLNETLCP
TWDQMLVFDNLELYGEAQELRDDPPIIVIEIYDQDSMGKADFMGRTFAKPLVKMADEAYC
PPRFPPQLEYYQIYRGNATAGDLLAAFELLQIGPAGKADLPPINGPVDVDRGPIMPVPVG
IRPVLSKYRVEVLFWGLRDLKRVNLAQVDRPRVDIECAGKGVQSSLIHNYKKNPNFNTLV
KWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAVSSLRRFIYRPPDCSAPSWNSTG
EVVVSMEPEVPIKKLETMVKLDATSDAIIKVDVAEEEKEKKKKRKKGTAEEPEEEEPDES
MLDWWSKYFASIDTMKEQLRQQEVSGIDGEDKEEMDSAEGLKGPMKGKEKARAAKEEKKK
RTQGPGPGPGQGSEAPEKKKPKIDELKVYPKELESEFNNFEDWLHTFNLLRGKTGDDEDG
STEEERTVGRFKGSLCVYKVPLPEDVSREAGYDPTYGMFQGIPSNDPINVLVRVYVVRAT
DLHPADINGKADPYIAIRLGKTDIRDKENYISKQLNPVFGKSFDIEASFPMESMLTVAVY
DWDLVGTDDLIGETKIDLENRFYSKHRATCGIAHTYSIHGYNIWRDPMKPSQILTRLCKE
GKVDGPHFGPPGRVKVANRVFTGPSEIEDENGQRKPTDEHVALSALRHWEDIPRVGCRLV
PEHVETRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGTPLDISPRKPKKYELRVIVWNTD
EVVLEDDDFFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYLFPFDYLAA
EEKIVISKKESMFSWDETEYKIPARLTLQIWDADHFSADDFLGAIELDLNRFPRGAKTAK
QCTMEMATGEVDVPLVSIFKQKRVKGWWPLLARNENDEFELTGKVEAELHLLTAEEAEKN
PVGLARNEPDPLEKPNRPDTAFVWFLNPLKSIKYLICTRYKWLIIKIVLALLGLLMLGLF
LYSLPGYMVKKLLGA
NT seq
5988 nt
NT seq
+upstream
nt +downstream
nt
atggccctgctcgtccacctcaagaccgtctcggagctgcggggcaggggcgaccggatt
gccaaagtgactttccgagggcagtccttctactcccgggtcctggagaactgcgaggat
gtggctgacttcgatgagacgttccggtggccagtggccagcaacattgacagaaccgag
atgctcgagattcagattttcaactacagcaaagtcttcagcaacaagctgatcgggact
ttccgcatggtgctgcagaaggtggtggaggagaaccacgtggaggtgaccgagactctg
atcgatgacaacaatgctatcatcaagaccagcctgtgtgtggaggttcgatatcaggcg
acagacggccaggtgggctcctgggatgacggagacttcctgggagatgagtctcttcaa
gaggaagagaaggacagccaggagacggatgggctgctccctggatcccgccccagctcc
cggccaccaggcgagaagagcttccggagcaaaggcagagagaagaccaagggaggcaga
gatggcgagcacaaagccgggaggagcgtgttctccgccatgaagctcggcaagaaccgg
ccccacaaggaggacccccaaagacaagatgaaccagcagtgctggagatggaggacctt
gaccacttggccattcgactgggagatgggctggatcctgactcagtgtctctggcctca
gtcactgccctcaccaccaatgtctccaacaagcgatctaagccagacatcaagatggag
ccaagtgccgggaggcccatggattaccaggtcagcatcacagtgatcgaggctcggcag
ctggtgggcttgaacatggaccctgtggtgtgcgtggaggtgggcgacgacaagaagtac
acatccatgaaggagtccaccaactgcccctactacaacgagtacttcgtcttcgacttc
catgtctctcctgacatcatgttcgacaagatcctcaagatctcggtgattcactccaag
aatctgctgcgcagtggcaccctggtgggctccttcaaaatggacgtggggactgtgtac
gcccagcctgagcaccagttctatcacaagtgggccatcctgtcagaccccgatgacatc
tctgccgggctgaagggttatgtgaagtgtgacgtcgctgtggtgggcaagggggacaac
atcaagacacctcacaaagccaatgagacagaagaagatgacattgaggggaacttgctg
ctccctgagggggtgcccgcagaacgccagtgggcccggttctacgtgaaaatttaccgt
gcggaggggctgccccgaatgaacaccagcctcatggccaacgtgaagaaggctttcatc
ggtgaaaacaaggacctcgtcgacccctacgtgcaagtcttctttgctggccagaagggc
aagacttcggtgcagaaaagcagctatgagcccctgtggaacgagcaggtcatcttcaca
gacctgttccccccactctgcaaacgcatgaaggtgcagatccgagactccgacaaggtc
aacgacgtggccatcggcacccacttcatcgacctgcgcaagatttccaacgatggagac
agaggcttcctgcccacactgggcccagcctgggtgaacatgtacggctccacacgcaac
tacacgctgctggacgagcaccaggacctgaacgagggcctgggggagggcgtgtccttc
cgtgcccgcctcatgctggccctggctgtggaaatcctggacacctccaaccccgagctc
accagctccacagaggtgcaggtggagcaggccacgcctgtctcagagagctgcacaggg
aaaatggaagaattctttctatttggagccttcctggaggcctcaatgatcgacaggaag
aacggagacaagccaatcacctttgaggtgaccataggcaactatgggaacgaagttgac
ggcctatcaagaccccagcggcctcggcccagaaaggaacccgggaacgaggaggaagta
gatctgatccagaactccagtgacgatgagggtgatgatggcggagacctggcctcagtg
tcctccaccccgcccatgcggccccagatcacagataggaactacttccatctgccctat
ctggagcgcaagccctgcatctacatcaagagctggtggccagaccagcgtcgccgcctc
tacaacgccaacatcatggaccacatcgctgacaagctggaagaaggactgaatgacgtg
caggagatgatcaaaacggagaagtcctatcctgagcgccgcctgcggggagtcctggag
gagctcagctgtggctgccaccgcttcctctccctcgctgacaaggaccagggccactcg
tcatgcaccaggctggatcgggagcgcctcaagtcctgcatgagggagctggagagcatg
gggcagcaggccaggagcctgcgggctcaggtgaagcggcacacggtgcgtgacaagctg
aggctgtgccagaacttcctacagaagctgcgcttcctggcagacgagccccagcacagc
atccctgacgtcttcatctggatgatgagcagcaacaagcgggtcgcctatgcccgggta
ccctccaaggacctgctcttctccattgtggaggaggagctgggcaaggactgtgccaag
gtcaagacgctcttcctcaagctgccagggaagcggggcttcggctcagcaggctggaca
gtgcaggccaagctggagctctacctgtggctgggcctcagcaagcagcggaaggacttc
ctgtgtggcctgccctgcggcttcgaagaggtcaaggcggcccagggcctgggacttcac
tccttcccgcccatcagcctggtctacaccaagaagcaggccttccagctccgagctcac
atgtaccaggcccgcagcctctttgccgcggacagcagtggtctttctgatcccttcgcc
cgcgtcttcttcatcaaccagagccagtgcacggaggtgctgaatgagacactgtgtccc
acctgggatcagatgctggtgtttgacaacctggagctgtatggagaagcccaggagttg
cgggatgatccccccatcattgtcattgaaatctatgaccaggacagcatgggcaaagcc
gacttcatgggtcggaccttcgccaagcccctggtgaagatggcagatgaggcatactgc
ccaccccgcttcccgccccagctcgagtactaccagatctaccgcggcaacgccacagcc
ggagacctactggctgccttcgagctgctgcagattggaccggcaggaaaggccgacctg
cccccgatcaatggcccggtggatgtggaccgagggcccatcatgcctgtgcctgtgggc
atccggcccgtgctcagcaagtaccgggtggaggtgctgttctggggccttcgggacctg
aaacgggtgaacctggcccaggtggaccgaccgcgcgtggacatcgagtgtgcagggaag
ggggtgcagtcatccctgatccacaattacaagaagaaccccaacttcaataccctggtc
aagtggtttgaagtggacctgccagagaatgagctactgcacccgcccctgaacatccgc
gtggtggactgtcgcgccttcggccgctacacactggtgggctcccacgccgtcagctcc
ttgcggcgcttcatctaccggcccccggactgctcggcccccagctggaacagcactggg
gaggttgtggtgagcatggaaccagaggtgcccatcaagaaactggagaccatggtgaag
ctggacgcgacttctgatgccatcatcaaggtggatgtggctgaagaggagaaggagaag
aagaagaagaggaagaaaggcaccgccgaggagccagaggaagaggagccagacgagagc
atgctggactggtggtccaagtactttgcctccatcgacaccatgaaggagcaacttcga
caacaagaggtctcagggattgacggggaggacaaggaggagatggacagcgcagagggc
ctaaaggggccaatgaagggcaaggagaaggcaagggctgcaaaggaggagaagaagaag
agaacccagggccccggccccggccccggccaagggtctgaggcaccggagaagaagaaa
cccaagattgatgagctgaaggtgtaccccaaggagctggaatcagagttcaataacttc
gaggactggctgcacaccttcaacctgctgcggggcaagacgggggacgatgaggacgga
tccaccgaggaagagcgcactgtgggccggttcaagggctccctctgtgtgtacaaagtg
ccactcccagaggatgtttccagggaagcgggttacgatcccacctacggcatgttccag
ggcatcccgagcaatgaccccatcaacgtgctggtccgagtctatgtggtccgggccaca
gacctgcaccctgcggacatcaacggcaaggctgacccctacattgccatccggctgggc
aagactgacatccgtgacaaagagaactacatctccaagcagctcaacccggtctttggg
aagtccttcgacatcgaggcctccttccccatggaatccatgctgacagtggctgtgtac
gactgggatcttgtgggcaccgacgacctcattggggaaaccaagatcgacctagagaac
cgcttctacagcaagcaccgcgccacctgcgggatcgcccacacctactccatacatggc
tacaatatctggagggaccctatgaagccaagccagatcctgacacgcctctgtaaagag
ggcaaagtagacggtccccacttcgggccccctgggcgagtgaaggtggccaaccgtgtg
ttcaccgggccctctgagatcgaggatgaaaacggtcagaggaagcccacggatgagcac
gtggccctgtctgccctgaggcactgggaggacatcccccgcgtgggctgccgcctggtg
ccagaacatgtggaaaccaggccactgctgaaccccgacaagccaggaatagagcagggt
cgcctggagctgtgggtggacatgttccccatggacatgccagcccctggaacgcctctg
gacatctcccccaggaagcccaagaagtacgagctgcgggtcatcgtgtggaacacggac
gaggtggtcctggaggacgatgacttcttcactggcgagaagtccagtgacatttttgtc
cgggggtggctcaagggccagcaggaggacaagcaggacacggacgtccactatcactcc
ctcactggtgagggcaacttcaactggcgctacctgttccccttcgactacctggcagct
gaggagaaaatcgtcatctccaagaaggagtccatgttctcctgggatgagactgagtac
aagatccccgcgcggctcaccctgcagatctgggacgctgaccacttctcagcagacgac
ttcctgggggccatcgagctggacctgaaccggttcccgcggggcgccaagacagccaag
cagtgcaccatggagatggccaccggggaggtggacgtgcccctggtttccatcttcaag
cagaagcgggtcaaaggctggtggccactcctggcccgcaatgagaatgacgagttcgag
ctcacgggcaaagtggaggcggagctgcatttgctgacagcagaggaggctgagaagaat
ccagtgggcctggcccgcaacgaacctgaccccctagagaaacccaaccggcccgacacg
gccttcgtctggttcctcaacccgctcaagtccatcaagtacctcatctgcacccggtac
aagtggctcatcatcaagatcgtgctggcgctgctggggctgctcatgctgggcctcttc
ctctacagcctccccggctacatggtcaagaagctgctaggggcgtga
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