Ipomoea triloba (trilobed morning glory): 116021601
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Entry
116021601 CDS
T07384
Name
(RefSeq) BRISC and BRCA1-A complex member 2 isoform X1
KO
K12173
BRCA1-A complex subunit BRE
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116021601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116021601
03036 Chromosome and associated proteins [BR:
itr03036
]
116021601
03400 DNA repair and recombination proteins [BR:
itr03400
]
116021601
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
116021601
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
116021601
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
116021601
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
116021601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
116021601
NCBI-ProteinID:
XP_031117897
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All DBs
Position
6:23114389..23118810
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AA seq
372 aa
AA seq
DB search
MAIDSVPPLIAAQLNYLVSHCPFPIKVEQMWGGGKNPGLLDRFTLVIPFCLDNIKWDVIY
NAVYPLMAPDIIFGPEDENFQPYHSLGDEADTKNALTDWNNKDPSRLLSLILELRELYMA
YQRKRVGEVDDDRLKFEFSTMLPREGIEYFLSSGIDKPEEVKFSIPLLDLDLNKMVAGST
WRHQQKIYLQQVIFPVGRKYSAPRLKLVSSPEVKALFSVEDFRLPSWVDGMCTAEYLPAL
EVNLATQIKDAVSSIEIRRKFIVALAPLLGRPLEADPVFCRKASFLSHSGVFNFLVHFTI
PLQFPKQQPSLVLQSAQHFNSLNIPIKSGVITEYPWSPRWEASEMAERIFDFLLEECLNF
KKYCNETMFQQR
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgatagcgtccctcctctcatcgccgctcagctcaattacctagtctctcac
tgccccttccctatcaaggtagagcaaatgtggggaggaggcaaaaaccctggcctgctt
gatcgcttcactttagttatcccattttgcctcgacaacatcaagtgggatgttatatac
aatgcagtgtacccactcatggctccggatataatatttgggccggaagacgagaatttt
cagccatatcatagtcttggtgatgaagcggacacgaagaatgcattgactgactggaac
aacaaagatccttcccggcttttgtcgctcattcttgagcttagggagttgtatatggct
taccaaaggaaacgagttggagaagtggatgatgatagattaaagtttgaattcagcact
atgcttccaagagagggaattgaatactttttgagttctggcattgacaagccagaagag
gttaaattttccatacctttactggatttggacttgaacaagatggttgctggatccacc
tggagacatcagcagaagatatatttacagcaggtcatatttcctgttggcagaaaatac
tcagctccacgcctgaaactggtttcttctcccgaagtgaaagcactcttttctgttgaa
gatttcaggcttccttcgtgggtggatggaatgtgtactgctgaataccttccagcttta
gaagtcaatcttgcaacacagattaaagatgcagtttcatccattgaaatcagaaggaaa
ttcattgtggccttagctcctcttttaggaaggccactagaagctgatccggttttctgc
agaaaggctagctttttatcacactctggggttttcaatttcctggtacactttaccatc
ccactccagttccctaagcaacaaccaagtttggtgctacagagtgcacagcacttcaat
tcccttaacatacccatcaagtctggtgtcataactgaatacccttggagccctagatgg
gaagcatcagaaatggcggagaggatcttcgattttcttctggaggaatgcttgaacttc
aaaaagtactgcaacgagacaatgttccaacaacggtga
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