Ipomoea triloba (trilobed morning glory): 116025554
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Entry
116025554 CDS
T07384
Name
(RefSeq) transcription factor PIF1
KO
K16189
phytochrome-interacting factor
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
116025554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
itr03000
]
116025554
Transcription factors [BR:
itr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
116025554
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Motif
Pfam:
HLH
bHLH_SAC51
SRP-alpha_N
Motif
Other DBs
NCBI-GeneID:
116025554
NCBI-ProteinID:
XP_031122679
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Position
7:complement(23334379..23340787)
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AA seq
540 aa
AA seq
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MNHCVPDFDMDEDFNLPPTATSSSGLTRHKKSAMAEEDIMELLWQNGQVVVHSQNHRSLH
KSHFSGDAAIPAEQPVTKEIRPAGEETAANQHVFMQEDEMASWLHYPLEEPSFDRDLYAD
LLYPPASSSPVYAAPTTAAPPREIRPPVSEIRQLPMHQPPTPRPPIIPPAKRTDLEGAPR
VQNFGHFSRLPRARIEPGPSSSSQAARESTVVDSNETPMVKAESILSRVAESAAPISGGN
VGCGTVSGTVATGTSTGNREMMTCEQTMTSSPGGSGASATAEPPQKPAPTATDDRKRKGR
ETDDTEGHSEDIDLESADTKKQSRGSATKRSRAAEVHNLSERRRRDRINEKMRALQELIP
RCNKSDKASMLDDAIEYLKSLQLQVQMMSMGCGMVPMMYPGIQQYMPAMGMNMSMGMCMD
MGMNRAMVPYPPILPGSSLPNATAAAQINPRFAMPPSFPMPPVPMPDPSRVQTSNQPDPM
LNPLITHNPNPQQIPNCADPYQQLFGLHQAQATLPLNQTVEHPINSKPSSSKDVGNPGNH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaatcactgcgttccggattttgacatggatgaggacttcaatcttccacccaccgct
acttcttcctctggtttaaccaggcataagaagtctgcaatggctgaagaggatatcatg
gagctgctatggcagaacggtcaagttgttgtgcatagtcaaaaccatagatctttacat
aaatctcacttttccggggatgcggcgattccggctgagcagcctgtcaccaaggagatt
cgaccggcgggggaagaaacggcggcgaatcagcatgtgttcatgcaggaggatgagatg
gcgtcttggcttcactaccctctcgaagagccctcgtttgaccgtgatctctacgccgat
ttgctgtatccaccagcttcgtcttctcccgtctacgccgccccaaccaccgccgcgcca
ccgcgcgaaatccgtccgcccgtatctgagatccgtcagcttccgatgcatcagccgcca
actccaaggccgcctattatacctccggcaaaacgcaccgacctcgaaggcgcgccacgt
gtacagaatttcggccatttttcgcggctgcctagggctaggatcgaacctggaccctcg
agctcgagccaggctgcgagagaatcgacggtcgtggactctaacgagactccgatggtg
aaagctgaatctatactttcacgcgtcgcagaaagtgcggcgccgatttctggcgggaat
gtagggtgcggcaccgtaagcggcactgtagccaccggcacgtccaccggcaatagggaa
atgatgacgtgtgaacaaacgatgacgtcatcccccggcggctcaggagccagcgccact
gcggagccgccacagaagccggcgccaacagcgacggacgatcggaagcgtaaaggaaga
gaaacggacgacacggagggtcacagtgaggacattgacttagagtctgctgatacaaag
aagcaatctcgtggttcagctacaaagagatctcgtgctgcagaagtccataatctctca
gaaaggaggcgtcgagataggattaatgaaaagatgagggctttgcaggaactcatacca
cgatgcaacaagtcagacaaagcttcaatgttagacgatgcaattgagtacttgaaatcg
ctacaattgcaagtgcaaatgatgtctatgggatgtggcatggtccctatgatgtatcct
ggtatccagcaatatatgccagcaatgggtatgaatatgagcatggggatgtgcatggat
atgggcatgaatcgtgcaatggttccatatccaccaattctacccggttcgtcattgcca
aatgcaactgcagcagcacagataaatccacggtttgctatgccaccatcatttccaatg
ccaccagttcctatgccagatccatctagagttcagacctcaaaccaacccgatcccatg
ctaaacccactcatcacccataatcctaacccgcaacaaataccaaactgtgctgatcca
tatcagcaattatttggtcttcaccaggcacaagcaacattaccgctgaatcaaacagtg
gaacatcctattaacagcaagccaagcagcagcaaagatgttgggaatccagggaatcat
taa
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