Ipomoea triloba (trilobed morning glory): 116028090
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Entry
116028090 CDS
T07384
Name
(RefSeq) transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04075
Plant hormone signal transduction
itr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
116028090
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
116028090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
itr03000
]
116028090
Transcription factors [BR:
itr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
116028090
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Epiglycanin_C
Svs_4_5_6
Motif
Other DBs
NCBI-GeneID:
116028090
NCBI-ProteinID:
XP_031125750
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Position
1:complement(9605737..9610951)
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AA seq
663 aa
AA seq
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MPLSEFLKLHKLEFGEPKTASSSPDLSSFFENEVVELVWENGQIVMQGQSSRAKRSPTSN
NLSSSQMPVIRDKPKENPSTPRIGGKAFLMDEMPLSVPTNEVDLSQDDEIVPWLNYSLNN
NSLQYEYSSGVVPEASGLTANELPAQNNFASMDKTGGSNPMAVNNSSQRTASKLESSRFG
MFPSWSYKAHHPSVPSLGSGASDIGISNASNSLDSILRDSVPGQASVDTKMQKQETSIPG
RGPPGLLNFSHFWRPVAHTRANTGNIAGSPAIESKENKEKELSANCRNPVNPAPAETCST
SKREIGRHNQPDLQCFKIDHRPATAKTHDASFPLEEPNTSLSEDMKKNNNNWYGQPIDPV
VNKGVLGGDKAVEPGAVCSSVCSGSSPERTSNDQSNSLKRKYCDHESGCQSEDIEEESLD
ARKAAPVRGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKTDKASMLDEAI
EYLKTLQFQVQILSMGAGFCVPPIIYPAGMHATHMPHFPLMGLGMGMGVGMGMGFGMGIQ
EMNGRSPGCPLFPISPMQRVQLSSPPFSGPSTFPGIAASNFPVFGHPGLGIPISIPKPPT
ISKSGQPARSSAVGMGASRAGIQVEVPSATLKPEDLVKTKSSQLMNNTDPNRSINQTSSQ
RKV
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctctgagtttttgaagttgcataagcttgagtttggggagccaaaaacagct
tcatcttcgcccgatttatcttctttttttgaaaatgaagtggttgagcttgtatgggaa
aatggccagattgttatgcaaggtcagtcaagcagagctaagaggagtcctacttctaac
aatctatcctcctcacaaatgcccgtgattcgagacaagcctaaagaaaatccctccacc
ccgaggatcggaggaaaggcgtttttaatggatgaaatgccgttatctgtacccaccaat
gaagtggatttgagccaggatgatgagattgtgccttggttaaattactcactaaataat
aatagtctgcagtatgaatatagttctggagtagtacctgaagcatctggtctgactgca
aacgaacttcctgcacaaaataatttcgcttcgatggataagacaggtggttctaatccg
atggcagtgaataattcttcacagagaactgcttcaaaactcgagtcttctagatttggg
atgttcccttcgtggtcttataaagctcaccacccatcagttccatccctgggatcaggt
gcttcagatatcggaattagtaatgccagcaacagcctagattctattttgcgagattca
gttcctggccaagcttcagtggatacgaagatgcaaaagcaagaaacaagcattccggga
agaggcccccccggtttattaaatttctctcatttctggagaccagttgcacataccaga
gctaatactgggaacattgcaggttcacctgcaatagaatcgaaggaaaataaagagaaa
gagctaagtgcaaattgccgtaatcctgtaaatcctgcacctgctgaaacatgtagcacc
tcaaaaagggaaattggccgtcacaatcagcctgatttacaatgttttaagattgaccac
agaccagctactgctaagactcatgatgcgtcgtttccccttgaagagcccaatacatct
ttgagtgaggatatgaagaagaataacaataactggtatggtcaacccattgatccagtt
gtgaacaaaggagtcttaggtggtgacaaagctgttgaacctggggccgtttgttcttct
gtatgctccggcagtagtccagagagaacttcaaacgatcagtccaatagtttaaaaaga
aaatattgtgatcatgagtctggatgccaaagtgaagatattgaagaagaatctctcgat
gcgagaaaagcagctcctgttcgaggaggtactgggtcaaaaagaagccgagcggcagaa
gtgcacaacctatctgaaagacggcggagggacaggatcaatgaaaagatgcgcgcatta
caggaactcatacctaactgcaataagacggataaagcttcaatgcttgatgaagctatt
gagtatttgaagacacttcaatttcaagtgcagattctgtcaatgggagcaggtttttgt
gtacctccaattatatatccagcgggtatgcatgccactcacatgccacattttcctctt
atgggtcttgggatgggaatgggagtgggaatgggaatgggttttggtatgggtatacaa
gaaatgaacggtagatcccctggatgtcctttatttccaatatcccctatgcaacgagta
caactgtcttccccccctttttccgggcctagtacctttccaggaatagctgcatctaat
tttccagtttttggacatcccggtctaggtattcccatatcaatcccaaaaccacctacc
atttctaaatcagggcaacctgcccgtagttcagctgtgggtatgggtgcctcaagggcg
ggaattcaagtagaagtcccatctgctacactgaaacctgaggatctcgtaaagaccaag
agctcacaactgatgaacaataccgatcccaatcgatcaataaatcaaacatcatctcag
aggaaagtgtag
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