Ipomoea triloba (trilobed morning glory): 116028568
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Entry
116028568 CDS
T07384
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B-like
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116028568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116028568
03041 Spliceosome [BR:
itr03041
]
116028568
03032 DNA replication proteins [BR:
itr03032
]
116028568
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
116028568
Spliceosome [BR:
itr03041
]
Complex A
U1 snRNP components
Sm proteins
116028568
U2 snRNP components
116028568
Complex B
U1 snRNP components
116028568
U4/U6.U5 tri-snRNP components
116028568
Complex C
U2 snRNP components
116028568
DNA replication proteins [BR:
itr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
116028568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
116028568
NCBI-ProteinID:
XP_031126176
LinkDB
All DBs
Position
9:complement(20559199..20561982)
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AA seq
255 aa
AA seq
DB search
MSMSKTSKMLQYINYRIRVTVQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPTKGSKEE
REDRRTLGLLLLRGEEVISMTVEGPPPPDESRVKATGAANGVPGPGIGRGAGRGVPTGPL
VQAQPGLAGPVRGVGGPAPGMMQPQISRPPINYPQQPPPGMAPPPQPLMARSGVPPMGAP
QQFRPLPPGQFPPQFGQRPMVPPPPMMRGPPPPGAPPRPNMPGQPPRPGMPPPPPGGQVH
VFGPPRPGMPPPQNQ
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaaaacttccaagatgcttcaatacatcaattatcggatacgtgtcacg
gtccaggacggccgtcagttggtcggaaaattcatggctttcgatcgccacatgaatctc
gttctcggagattgcgaggagttccggaagcttccaccgactaagggctcgaaagaagag
cgcgaggatcgccgcactctcggccttctcctcctccgtggcgaagaagttatctccatg
actgttgagggtccgcctcctcccgatgaatcccgcgtcaaggcaactggagctgcaaat
ggcgttcccgggcccggtattggtcgtggcgctgggagaggggttcctactgggccgttg
gttcaggcccagcccggacttgctggtccggttcgtggtgttggtgggcccgctccggga
atgatgcaacctcagatctctcgtcctccgatcaactaccctcagcaaccgcctccggga
atggctcctccaccgcagcccttgatggctagatcaggcgtgcctccaatgggagcgccg
cagcagttccgacctcttccgccagggcaattcccgccgcagtttgggcaacggcctatg
gtgccgcctcctcctatgatgaggggtccaccacctcccggagctccgcctaggcccaat
atgcctggacagcctcctcgccctgggatgccgcctccacctcctggtggtcaagttcat
gtctttggacctccccgtcctggaatgccgcccccacagaatcagtag
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integrated database retrieval system
