Ipomoea triloba (trilobed morning glory): 116032601
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Entry
116032601 CDS
T07384
Name
(RefSeq) transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04075
Plant hormone signal transduction
itr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
116032601
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
116032601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
itr03000
]
116032601
Transcription factors [BR:
itr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
116032601
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
ECSCR
Motif
Other DBs
NCBI-GeneID:
116032601
NCBI-ProteinID:
XP_031131108
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All DBs
Position
10:20118403..20123425
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AA seq
697 aa
AA seq
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MPLSEFLKMLKNESGERKPTSSSADDLSPLPGSDFSELVWENGQISMQGQSSKAKKSDNN
LSLQASRMREKCVGNASASRIGKLDLAGSVLDEMPPSVPSGEMDLSQDDEIAPWLNYSPT
NGQSQEYGSQLLPEISGMTANDDGFALIDKGVCCNLMVGASKSVPNHNVVNSGQRNASKV
DCSPTPRFGLLASWSSQQANPLVSGVSDIGSSNGSINLDSILKDSVPPQASAGMKIQNQD
TETPRTCPTLLNFSNFSRPVVLARANLQNLTSTLEAKGKREKEIKENTQNPAKTALIEAC
STSRKESDLKSEPNLISTKFEPRPTLGKPHGESSPLEQTDASFREDTNDADKAHGKLISP
AYVGRVLDGDKTAEPGACSSVCSGSSAERASNDQSHSLKRRTRENEESGCPSEDAEEESA
GAKKAAPARGGTGLKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEA
IEYLKTLQLQVQIMSMGAGLCMPQMMFPAGMHHHMHAQMPHFPQMGLGIGMGMGFGMGLP
ELSGRSPGCPIYPVPAMPRPHFPSPSMSGPINFPGMAAASNIQAFGHPCQGVSMSVPRTP
FVPLSQQPSASSAPGLNASKMRMNGEVPSKSTMLHPEDPEKIKNLQLTQNSDPIPSRLKN
QTSQVQTTRDQQPNASDDPTVNPTNSTNVPGSKAAGM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctctgagttcttgaaaatgcttaagaatgaatctggggagcggaaaccaacg
tcgtcttctgctgatgatctatctcctttaccagggagtgatttttctgaacttgtgtgg
gaaaatggtcagattagtatgcaaggtcagtcgagtaaagctaagaagagtgacaataat
ctttcgttgcaagcgtctaggatgcgggagaagtgcgtagggaatgcctcggcctctagg
attgggaagttagatttagcgggttctgttttggatgaaatgcctccatcagtgccctct
ggcgagatggatttgagccaggatgacgagattgctccctggctaaactattcgcctact
aatggtcagtcacaagagtatggctctcaacttttgcctgaaatatctggtatgactgca
aatgatgatggtttcgcgttgattgataagggggtttgttgtaacctcatggttggggct
tccaagagtgttcctaatcacaatgttgtgaactcgggacagagaaatgcatcgaaagtt
gattgttctcctactcctaggtttggactgttagcctcgtggtcttctcagcaagctaac
ccccttgtatcgggagtttcagatatcggtagcagtaatggtagtatcaatctcgattct
atattgaaagattcagttccaccccaagcttcagctggtatgaagatacaaaatcaagac
accgaaacccctcgaacttgccctactttgttaaacttttctaatttctccagacctgtt
gtgcttgccagagctaatcttcagaaccttacttcgactttagaagcaaagggaaaaagg
gagaaggagatcaaagaaaatacccagaatcctgctaaaaccgcgcttattgaagcatgt
agcacctcaagaaaggaaagtgaccttaaaagtgaacccaacttaataagcactaaattt
gaaccaagaccaacactgggaaagcctcacggtgagtcgtccccccttgaacagaccgat
gcttcattcagagaagatactaatgatgctgacaaggcccatggtaaacttattagtccc
gcttatgtgggaagagttttggatggtgataaaactgctgagcctggggcttgttcttct
gtatgctctggcagtagtgcagagagagcttcaaatgatcagtcccacagtttaaagaga
agaactcgagaaaacgaggagtctggatgcccaagtgaagatgcagaagaagaatcagct
ggtgcgaaaaaagcagctcctgctagaggaggaacagggctaaagagaagccgagctgca
gaagtgcacaatctatcagaaaggcgacgaagagacaggatcaatgaaaagatgcgggca
ttgcaggaacttatacccaactgtaataaggcggataaagcttcaatgcttgatgaagct
atcgaatatttgaagacacttcaacttcaagtgcagattatgtcaatgggagcgggattg
tgtatgccacaaatgatgttccccgcaggaatgcatcatcacatgcatgctcaaatgcca
cattttcctcagatgggcttagggatagggatgggcatgggttttggcatgggcttgccc
gagcttagtggcagatccccgggatgtcccatctatccagtgcccgctatgccaagacca
catttcccttccccgtcaatgtctggacccattaactttccaggaatggctgcagcgtct
aatattcaggctttcggacatccttgtcaaggggtttcgatgtcggtcccaagaacgcca
ttcgtccctttgtcacagcagccttctgcaagttcagccccgggcttgaatgcctcaaag
atgagaatgaatggagaagtcccaagcaagtcgactatgttgcaccccgaggatccggaa
aagatcaagaacttgcagctgacacagaattctgatcctatacctagtcggttaaaaaat
cagaccagtcaggttcaaacaacaagagatcaacaacccaatgctagcgatgacccaact
gttaacccgacaaactcaaccaacgtgccaggcagcaaagcagcaggtatgtaa
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