Janthinobacterium sp. B9-8: VN23_01475
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Entry
VN23_01475 CDS
T04271
Name
(GenBank) RND transporter
KO
K18138
multidrug efflux pump
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab01501
beta-Lactam resistance
jab01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VN23_01475
01503 Cationic antimicrobial peptide (CAMP) resistance
VN23_01475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jab02000
]
VN23_01475
01504 Antimicrobial resistance genes [BR:
jab01504
]
VN23_01475
Transporters [BR:
jab02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VN23_01475
Antimicrobial resistance genes [BR:
jab01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VN23_01475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AMC33368
UniProt:
A0A0X8GJI6
LinkDB
All DBs
Position
complement(352447..355518)
Genome browser
AA seq
1023 aa
AA seq
DB search
MNFSAWSIRNPIPAIMLFVLLSLAGVLSFQSMKVQDFPDIELPMVTVTAIQPGAAPAQLE
SEVARKLENSVSALQGVKHVYSKIQDGSVMLTVEFVLEKPVNEAVDDVRNAISGVRGDLP
SDLKDPVIGKVEFSGVPFLVFTVASNTLGEEALSWLVDNKISKEVRAVSGVGKFARVGGI
SREVRVEIDPARLAALGVSAADVSRSLAQTQRDSSGGRSDLIGSEQAIRTISTVQSAGEL
GQMTLPLNDGRSIRLDQVATITDTTAERRSIALLDGKPVVGFEISRSRGASEIEVAAGIH
TALEKIKAANAGLTITAAYDMAEPVQESFDGSMTLLWEGALLAVLVVWWFLRDWRATLVS
AAALPLSILPAFIGMAYLGFSLNTVTLLSLALVVGILVDDAIVEIENIVRHLRMGKSPYQ
AAMEAADEIGLAVVATTFALIAVFLPTAFMAGIPGKFFKQFGWTAALAVMASLIVARLLT
PMMAAYILKPITHEHKEGRIMLAYLKLAHWCLEHRKLTALFSLLFFIGSLMLVPLLPTGF
IPPDDRSQTLVKIELPPGTTLEETSSVAERARLLLASEKSVTRVYTAIGGGGAGADPMAA
GGVTEVNKANLTLTLSERTARDKKIEIESRLRDLLKDIPGVRVSVGLGGSGEKFQLILRG
DDPATLVATAQNVERDMRTLQGVGAVTSSASLVRPEVTIRPDLARAADLGVSIASISDTT
RISTVGDFDTSVAKLNLPERQIPIVVRLPDSTRKDLEQIKQLKVLGKNGDVMLGEVASVA
LSSGPSQIDRYDRARNVIFDIELNGRSLGEVSAEVDQLPSLLQLPKGVERAAFGDAEEMK
KLFASFGIAMLTGVLCIYMVLVLLFKDFMQPVTILAALPLSIGGAFLALLIAQSSFSMPT
LIGLIMLMGIATKNSILLVEYAIVARRDGMSRFDALMDAGLKRARPIVMTTIAMGAGMLP
IALGIGIDPSFRSPMAIAVIGGLITSTLLSLLVVPVVFTFVDDFVQWLSKHRKGKVGASS
AES
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttctgcttggtcgatcagaaaccccatcccggccattatgttatttgtcttg
ctgtctctggccggtgtgctgtctttccagagtatgaaggtgcaagacttccctgatatt
gagctgccgatggtgacggtaacggccattcagcctggggctgcaccagcccagctggaa
agcgaagtcgccagaaagcttgaaaactcagtatccgccttgcagggggtgaagcacgtt
tacagcaagattcaagacggtagcgtgatgctgacggttgaatttgtgctggaaaaaccc
gtcaacgaagcggtagacgatgtacgcaatgccatcagcggcgtgcggggtgatctgcct
agcgatctgaaagaccccgtgattggcaaggtggaattctcgggtgtgccatttttagtc
tttactgtggcatccaataccttaggggaagaagctctttcctggctggtggataataaa
atcagcaaggaagttcgcgcagtttctggcgtaggtaagtttgcccgtgtgggcgggatt
agccgagaagtacgcgtagaaatcgacccagcacgcctcgccgccttaggggtgagcgct
gccgatgtttcccgtagcctcgcgcaaacccagcgtgattcatcgggggggcgcagtgat
ttaatcggtagcgagcaagccattcgcaccatctctaccgtacaaagtgcaggcgagcta
ggccagatgacgctgccactgaacgatggtcgcagcattcgccttgatcaagtggccacc
attaccgacaccacagccgagcgccgctcgattgccctcttggatggcaagccggtggtg
ggctttgaaatcagccgttcgcgcggcgcaagtgaaatcgaagttgccgcaggcatccac
actgcgctggaaaaaatcaaggcggccaacgcggggctcaccatcaccgcagcctatgac
atggccgagcccgtgcaagaatcttttgatggatcgatgaccctgctatgggaaggtgcc
ctgctcgcggtgctggtggtgtggtggtttttacgcgattggcgcgccaccttagtttct
gccgccgccttgccgctgtctatcttgccggcatttattggcatggcttatttaggattc
agcttaaatactgtcacgctgctttccttggcccttgtggtagggattttggtcgatgac
gcgattgtagaaattgaaaacatcgtccgccatttacgcatgggcaaatcgccttatcag
gctgcgatggaagccgcggatgagattggccttgcagtcgttgctaccacctttgccctg
attgccgtgtttttgcctaccgcgtttatggccgggattccaggtaaattctttaagcaa
tttggctggacagcggcgctggccgtgatggcttccctgattgtggcccgtttactcacg
ccgatgatggcggcttatattctaaaacccatcacgcatgaacataaagaaggccgcatt
atgctggcctacttaaaactggcgcactggtgtctggagcatcgcaagctcaccgccttg
ttctcgctgctgttttttattggctcgctgatgctggtgccgctgctgcctaccggcttt
attccgccagatgaccgctcgcaaacgctggtcaaaattgaattgccgcccggtactacg
ctggaagaaaccagcagcgtggcggaacgtgctcgcctcttgctagctagcgaaaaatca
gtgacgcgcgtctataccgccattggcggcgggggtgcgggagcagatccgatggcagca
ggcggcgtcaccgaggtgaacaaggccaacctcacccttaccttaagcgagcgcacggcc
cgtgataagaaaatagaaatcgaatcacgtttacgtgacttactcaaagatattccaggt
gtgcgtgtgagcgtaggccttggcggatcaggggaaaaattccagctcattttaagaggg
gacgacccggccaccttggtcgctacggcgcagaatgtggaacgcgatatgcgcaccttg
caaggcgtgggagccgttacctcaagcgcaagtctggtgcggcccgaagtcaccatccgc
cccgatctggcccgcgcggccgatttaggcgtcagcattgccagtatctcggacacaacc
cgtatctctaccgtcggcgattttgatacctccgtcgccaagctgaatctgcccgagcgg
caaatccccatcgtggtacgcctgcccgacagcacgcgcaaagatttggagcaaatcaag
caacttaaagtgcttggtaaaaatggcgacgtaatgcttggcgaagtggccagcgtagcg
ttatcttcaggccctagccagattgatcgctacgacagagccagaaatgtgatttttgat
atcgagctcaatggccgctcgcttggcgaagtcagtgctgaagtcgatcaattacctagc
ctgctgcaattgcctaagggcgtggagcgcgctgcctttggtgatgcagaagagatgaaa
aaactctttgccagctttggtatcgccatgctgaccggcgtgttgtgcatttacatggtg
ctggtgctgctgtttaaagactttatgcagcccgtcaccattctggccgccttaccttta
tccattggtggtgcatttttggcactgctcattgcccaaagctcattctctatgcctacg
ctaatcggcctgattatgctcatgggcatcgccaccaaaaactccattttgctggtcgaa
tacgccattgttgcccgtcgggatggcatgagccgctttgacgcgctaatggacgccggc
ctaaaacgcgcccgccccatcgtgatgaccaccatcgccatgggcgcaggcatgttgccc
attgcactgggtatcggcatcgaccccagctttagatcaccgatggcgattgccgtgatc
ggcgggctgatcacctccaccctgctcagtcttttagtcgtgccggtggtgtttaccttt
gtggatgattttgtgcagtggcttagcaagcataggaagggcaaggtaggagcgagctcg
gcagaaagctaa
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