Janthinobacterium sp. B9-8: VN23_16190
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Entry
VN23_16190 CDS
T04271
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab00300
Lysine biosynthesis
jab00550
Peptidoglycan biosynthesis
jab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VN23_16190
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VN23_16190
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
jab01011
]
VN23_16190
Enzymes [BR:
jab01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
VN23_16190
Peptidoglycan biosynthesis and degradation proteins [BR:
jab01011
]
Precursor biosynthesis
Amino acid ligase
VN23_16190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
AAA_26
Motif
Other DBs
NCBI-ProteinID:
AMC36029
UniProt:
A0A120II47
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All DBs
Position
3582822..3584303
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AA seq
493 aa
AA seq
DB search
MKAVSWNLPTLDLPAIDAIAANARLVVDSRNIQPGDVFLAFEGEYADGRSYIADAIAAGA
AAVLWEAEEFVWNPAWQTPNLAIPQLRAQAGIVAAHLLANPSRSMFVTGITGTNGKTSIA
NWLAQAFNLLGHKTGVLGTLGNGFIDKLESSTHTTLDPVTLQGWLSRLHSEGASHIAMEV
SSHGLEQGRVHGTDFDVAVFTNLTRDHLDYHGDMASYGAAKAKLFAWEDLKAAVINTDDA
FGRELASQCKAPRVLTYGLENGGIRATSVELTLSGLEMEVATPYGLCNISSPMLGRFNAS
NLLACLSVLLAADVPLAKAAHILGQIQPAAGRMQKLGGDERPLVVVDYAHTPDALEKALA
TLRESMPEKSRLYCIFGCGGDRDKGKRPLMGEIACRLADAVIITSDNPRSETPQAIIQDI
VRGVSGVPGTGHANYSIDSDRASAIVDAIDVASAKDVVLIAGKGHETYQEIAGIRHPFDD
VAIANRALARKKK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgtgagctggaacctccctactctcgaccttcctgcgattgacgccatcgcg
gcgaacgcgcgccttgtggtcgatagccgcaacattcagcccggcgatgtattcctcgct
tttgagggcgaatatgccgatggccgtagctatatcgctgacgccatcgccgctggtgct
gcagctgtcttgtgggaagccgaagaatttgtatggaatccggcatggcaaacacccaat
ctggcgattccgcaattacgcgctcaagcgggtattgtggccgcacatttattagctaat
ccatcccgctcgatgtttgtgaccggtattaccggcaccaatggcaaaacatcgattgcc
aattggctggcacaggcgtttaacctgcttggccataaaaccggcgtactgggcacgctg
ggcaatggctttattgataaattagaaagctccacccataccacactcgatcctgtcacc
ctgcaaggctggttgtcccgtctgcatagtgaaggggccagccatatcgcaatggaagtc
tcctcgcatggtttggagcaagggcgtgtgcacggcacagactttgatgtagccgtgttt
accaatctgacccgtgatcatctcgattaccacggtgatatggcgagctacggcgctgcc
aaagctaaattatttgcgtgggaagacttaaaagctgctgtcatcaataccgatgatgct
tttgggcgcgaattagcatcgcagtgtaaagccccacgcgtactgacttatggcttggaa
aacggcggaattcgcgccaccagcgttgagctcaccctttccggcctagaaatggaagtc
gccacgccctatggcctgtgcaatatcagctcaccgatgctgggccgctttaatgccagc
aatctgctggcctgcttgtctgtattgctggctgccgatgtgccgctcgctaaagccgcc
catattctggggcaaattcagcctgcggccggccggatgcaaaaactggggggtgacgag
cgccctctggtcgtggtggattacgcccacacaccggatgccttagaaaaagcgctggct
accctgcgcgaatccatgccagagaaaagccgcctttactgcatctttggctgcggtggg
gatagagacaaaggcaagcgtccgcttatgggcgaaatcgcctgccgcctggccgatgcg
gtaattatcaccagcgacaacccacgcagcgaaacaccacaagccattatccaagacatc
gtgcgcggtgtttccggcgtacccggcaccggccatgccaattacagcattgattcagac
cgcgcctcagcgattgtagatgccattgatgtggcaagcgccaaagacgttgtgctgatc
gcaggcaaaggccatgaaacctatcaggaaatcgcaggcattcgtcatcctttcgatgat
gtcgccattgccaaccgtgcattagcaaggaagaaaaaataa
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