Janthinobacterium sp. HH102: JAB4_048760
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Entry
JAB4_048760 CDS
T08624
Symbol
swrC
Name
(GenBank) Swarming motility protein SwrC
KO
K18138
multidrug efflux pump
Organism
jah
Janthinobacterium sp. HH102
Pathway
jah01501
beta-Lactam resistance
jah01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JAB4_048760 (swrC)
01503 Cationic antimicrobial peptide (CAMP) resistance
JAB4_048760 (swrC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jah02000
]
JAB4_048760 (swrC)
01504 Antimicrobial resistance genes [BR:
jah01504
]
JAB4_048760 (swrC)
Transporters [BR:
jah02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JAB4_048760 (swrC)
Antimicrobial resistance genes [BR:
jah01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JAB4_048760 (swrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
HMA
HisG
SecD_SecF_C
Col_cuticle_N
Motif
Other DBs
NCBI-ProteinID:
QOU75392
UniProt:
A0A853T2K8
LinkDB
All DBs
Position
5440706..5443822
Genome browser
AA seq
1038 aa
AA seq
DB search
MNFSSLSIKNPIPAIMLFALLTLAGLLAYKANPVQDFPDIELPIVTVSAVLPGAAPAQLE
TEVARKIEDSVATLQGVKNIYTKVLDGVVTVTVEFILEKQIAEAVNDVRDAVARVKADMP
AELRDPTVTKASTAGRVVLTFIATAKPGVDNPLDYPDLSWFVDNTVAKRLLTVPGVGAVT
RVGGVYREIQVELDEARMAALKVSALDVSRQLRLVQREAPGGRGDVSGAEQSVRTIATVK
TADELSRVEVPLPDGRHVRLDQVATVRDTIAEPRALAEQDGKTVVAFEVFRTKGASEVAV
AKGARDAIADLQKENPNVVLQQSIDNAFPVEENFDGSMELLYEGALLAVLVVWWFLRDWR
ATLVAAAALPLSVMPAFLGIYWFGYTLNTVTLLSLALVVGVLVDDAIVEIENIERHLRMG
KSPMEAAMEAADEIGMAVIATTFALVAVFLPTAFMSGIPGLFFKQFGWTAVLAVLASLVV
ARLLTPMMAAYILKPLPHKEEQDGWLMTRYLRVMRWCLNHRGITAIAAALFFVGAIALVP
LLPTGFVPAADRAQTQINLELPPGSTLAETQAVAALARDAAMRTQGIQGVFSSIGGGSSG
DAFAPGAAAEARRAVLTLTTVHRTERKESMADLETQLRHKLDTIPGARFTVGPPDTGVKM
QLVLRSEDPVALMAAAQKVERELRGLKGIGNVNSSASLVRPEIIVRPDFAKAADLGVTAA
AIGETVRVATAGDYDTDLTKMNLPERQVPIRVKLPNSVRADLAAIERLTVPGKNGPVRLA
NVATVTMESGPAQIDRLNRSRNVTLDVELGSRTLGELNEEARALPSMKNLPPSVKIAELG
DAQEMASLFASFGLAMLIGVLCIYCVLVLLFKDFMQPVTILAALPLSIGGAFVALLITGS
ALSMPSMIGLIMLMGIVTKNSILLVDYAILARQAGMNRFDALVDACHKRSRPILMTTIAM
GAGMMPLALGWGADPSFRSPMAITVIGGLITSTLLSLLVVPAVFTYIDDLEHLLKRGMAK
LRSQKAPLRRDDRVALEK
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttcctccctctcgatcaagaatccgatcccggccatcatgctgttcgcgctg
ctgactttggcaggcctgctggcctacaaggccaatccggtgcaggatttccccgacatc
gaactgcccatcgtcaccgtcagcgcggtgctgcccggcgccgcgccggcccagctggaa
acggaagtggcgcgcaagatcgaagactccgtcgccaccctgcaaggcgtgaaaaacatc
tacaccaaggtgctcgatggcgtcgtcacggtgaccgtcgaattcatcctggaaaagcag
atcgccgaagccgtcaacgacgtgcgcgacgccgtcgcgcgggtcaaggcggacatgccg
gccgagctgcgcgatcccaccgtcaccaaggcgtccacggccgggcgcgtggtgctgacc
tttatcgccacggcaaaacccggcgtggacaacccgctcgactatcccgacctgtcgtgg
ttcgtcgacaacacggtcgccaagcgcctcctgaccgtgcccggcgtgggcgccgtcacc
cgcgtgggcggcgtctaccgcgagatccaggtggaactcgacgaggcgcgcatggcggca
ttgaaggtctcggccctcgacgtctcgcgccagctgcgcctggtgcagcgcgaagcaccg
ggcggccggggcgacgtcagcggcgccgagcaatcggtgcgcaccatcgccaccgtgaaa
acggccgatgaactgtcgcgcgtggaagtgccgctgccggacggccgccatgtgcgcctg
gaccaggtggccaccgtgcgcgacaccatcgccgaaccgcgcgcgctggccgagcaggat
ggcaagaccgtggtcgccttcgaggtattccgcaccaagggtgccagcgaagtggccgtc
gccaagggcgcgcgcgacgccatcgccgacctgcaaaaggaaaacccgaatgtggtgctg
cagcagtcgatcgacaatgccttccccgtcgaggaaaacttcgacggttcgatggaactg
ctgtacgaaggcgcgctgctggccgtgctggtggtgtggtggttcctgcgcgactggcgc
gccaccctggtggccgccgccgccctgcccctgtccgtgatgccggccttcctcggcatc
tactggttcggctacacgctcaataccgtcacgctgctgtcgctggcgctggtcgtcggc
gtgctggtcgacgatgccatcgtggaaatcgaaaacatcgagcgccatctgcgcatgggc
aagtcgcccatggaagcggccatggaagcggccgacgaaatcggcatggcggtgatcgcc
accaccttcgcgctggtggccgtgttcctgccgacggccttcatgagcggcattcccggc
ctgttcttcaagcagttcggctggacggccgtgctggccgtgctggcctcgctggtggtg
gcgcggctgctcacgccgatgatggcggcctacatattgaaaccgctgccgcacaaggag
gaacaggacggctggctgatgacgcgctatctgcgcgtgatgcgctggtgcctgaaccac
cgcggcatcacggccatcgccgcggccctgttctttgtcggcgccatcgcgctcgtgccg
ctgctgccgaccggtttcgtgccggctgccgaccgtgcgcagacgcagatcaacctggaa
ctgccgcccggctccaccctggcggaaacgcaggccgtggcagcgctggcgcgcgacgcg
gccatgcgcacacaaggcatccagggcgtcttcagttcgatcggcgggggttccagcggc
gacgccttcgcccccggcgcggcggccgaggcgcgccgcgccgtgctgaccctgaccacc
gtgcaccgcacggagcgcaaggaatcgatggcggacctggaaacgcagctgcgccacaag
ctcgatacgatccccggcgcccgcttcacggtggggccgcccgacacgggcgtcaagatg
cagctggtgctgcgctcggaagacccggtggcgctgatggccgcggcgcaaaaggtcgag
cgtgaactgcgcggcctgaaaggcatcggcaacgtcaattccagcgcctcgctggtgcgt
ccggaaatcatcgtgcgccccgatttcgccaaggcggccgacctgggcgtgacggcggca
gccatcggcgagaccgtgcgcgtggccacggccggcgactacgacacggacctgacaaaa
atgaacctgcccgagcggcaggtgccgatccgcgtcaagctgcccaacagcgtgcgcgcc
gacctggccgccatcgagcgcctgaccgtgcccggcaagaatggccccgtgcgcctggcg
aacgtggccacggtgacgatggaaagcggcccggcgcagatcgaccggttgaaccgcagc
cgcaacgtcaccctcgacgtggaactcggttcgcgcacgctcggcgaactgaatgaagaa
gcgcgcgcgctgccgtcgatgaagaatctgccgccgtccgtgaagatcgccgaactgggc
gacgcgcaggaaatggcctcgctgttcgccagcttcggcctggccatgctgatcggcgtg
ctgtgcatctactgcgtgctggtgctgctgttcaaggacttcatgcagccggtgaccatc
ctggcggcgctgccgctgtcgatcggcggcgccttcgtggcgctgctgatcacgggcagc
gccctgtcgatgccgtcgatgatcggcctgatcatgctgatggggatcgtcacaaagaac
tccatcctgctggtcgactatgcgatcctggcgcgccaggccggcatgaaccgcttcgac
gcgctggtcgacgcctgccacaagcgcagccggcccatcctgatgacgacgatcgccatg
ggcgccggcatgatgccgctggcgctgggctggggcgccgaccccagcttccgttcgccg
atggccattaccgtcatcggcggcctgatcacctcgaccttattgagcctgctggtggtg
ccggccgtgttcacctacatcgacgacctggagcacctgctcaagcgcggcatggcgaaa
ctgcgcagccagaaggcgccgctgcggcgcgatgacagggtggcgctggaaaaataa
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