Janthinobacterium sp. 17J80-10: EKL02_04395
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Entry
EKL02_04395 CDS
T05896
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj00300
Lysine biosynthesis
jaj00550
Peptidoglycan biosynthesis
jaj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EKL02_04395
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EKL02_04395
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
jaj01011
]
EKL02_04395
Enzymes [BR:
jaj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
EKL02_04395
Peptidoglycan biosynthesis and degradation proteins [BR:
jaj01011
]
Precursor biosynthesis
Amino acid ligase
EKL02_04395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CC_Cfap43
Motif
Other DBs
NCBI-ProteinID:
QAU33482
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All DBs
Position
977878..979416
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AA seq
512 aa
AA seq
DB search
MIAPTRVPQQVVAWLQQTAPQAQLAADSRAIAAGDVFFAYPGDAGDGRRFIAQAIAAGAA
AVVYETEGFAWDDSWRVPQMAVAGLKAVAGEIACGFYGGPDRDMFVVAVTGTNGKTSCTQ
WLGAALSQLGTATGVIGTLGNGIYRQGVADNLAATGYTTPDAVLLQRSLDGLRQQGAEAL
AIEASSIGLEQGRMAGMHVDVAVFTNLTRDHLDYHGDMAAYEASKAMLFDWPGLRHAVIN
LDDDMGARLVRQVQNSAAPAALIGFSLTGKMAPGVAVLQASDIRSSHAGTTFALNSPFGS
AQVKTRLVGNFNVSNVLAIIGCLLARGIDWSAAIAAVEFLVAVPGRMQQLGGEDAPLVVI
DYAHTPDALEKTLAALRPVAQERQGALWCVFGCGGDRDPGKRPQMGKVSMLADHVIVTSD
NPRSEAAADIIAQIMQGMEEGLENMKHAPLAVEDRAGAILRAVRHAEKNDVILLAGKGHE
STQEIKGRKLPFLDADHAALALATRATHGGAL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccccgacacgcgttccgcaacaggtcgtggcctggctgcagcaaaccgcgccc
caagcgcagcttgccgccgattcgcgcgccattgccgcaggcgacgtgtttttcgcgtat
ccaggcgacgccggcgacggacgccggttcatcgcccaggcaattgcggcgggcgctgca
gcggtcgtctatgaaaccgagggcttcgcctgggacgacagctggcgggtgccgcagatg
gctgttgccggcttgaaggcggtggcgggtgaaatcgcctgcggcttttacggcgggccc
gatcgcgacatgttcgtggtggcggtcaccggcaccaatggcaagacttcatgcacccag
tggcttggcgcggcgctctcgcaactgggcaccgccaccggcgtgatcggcacgctcggc
aatggcatttatcggcagggtgtcgcagataatctggctgccaccggttataccacgccg
gatgccgtgctgctgcagcgcagcctggacggactgcgccagcagggcgctgaggcgctg
gcgatcgaagcctcctcgattggcctggagcaggggcgcatggcggggatgcacgtggac
gtggcggtttttaccaatctcacgcgcgaccatctggattaccatggcgacatggctgcc
tatgaagcctccaaggccatgctgttcgactggccgggcttgcgtcatgccgtcatcaac
ctggatgacgacatgggcgcgcgcctggtgcgccaggtgcaaaacagtgctgcgccggcc
gcgctcatcggcttcagcctgaccggcaagatggcgccaggcgtcgccgtgttgcaggcg
tccgatatccgtagcagccatgcaggcaccactttcgccctcaactcgcctttcggctct
gcccaggtgaaaaccaggctggtcggaaatttcaacgtcagcaatgtactggccattatt
ggctgcctgctggcgcgcggcattgactggagcgcggcaatcgctgccgtggaattcctg
gttgctgtacccggtcgcatgcagcagctcggcggcgaagatgcgccgttggtcgtgatc
gattacgcccataccccggatgcactggaaaaaacactggctgcgctgcgtcctgttgcg
caggagcggcagggtgcgctgtggtgcgtgttcggctgcggcggcgaccgggatccgggc
aagcgcccgcaaatgggcaaggtctcgatgctggccgatcatgtgatcgttaccagcgat
aatccgcgcagcgaagcggcggcggacatcattgcgcaaatcatgcaaggaatggaagaa
ggtttggaaaacatgaaacatgcgcctctggcggtcgaagaccgcgccggcgccatcctg
cgggccgtcaggcacgcggaaaagaacgacgtgatcctcctggccgggaagggtcacgag
agtacgcaggaaatcaagggacgcaagctgcctttcctggatgccgaccatgctgcgctg
gcattggccacgcgcgccacgcacggaggcgccctgtga
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