Janthinobacterium sp. 17J80-10: EKL02_04825
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Entry
EKL02_04825 CDS
T05896
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj01501
beta-Lactam resistance
jaj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EKL02_04825
01503 Cationic antimicrobial peptide (CAMP) resistance
EKL02_04825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jaj03036
]
EKL02_04825
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jaj02000
]
EKL02_04825
01504 Antimicrobial resistance genes [BR:
jaj01504
]
EKL02_04825
Chromosome and associated proteins [BR:
jaj03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EKL02_04825
Transporters [BR:
jaj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EKL02_04825
Antimicrobial resistance genes [BR:
jaj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EKL02_04825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CusB_dom_1
HlyD_D23
HlyD_3
Biotin_lipoyl_2
THOC7
N_NLPC_P60
PDZ_2
Motif
Other DBs
NCBI-ProteinID:
QAU33558
UniProt:
A0A410UQC0
LinkDB
All DBs
Position
complement(1075571..1076773)
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AA seq
400 aa
AA seq
DB search
MISPGRLTPIALIITAILLTACLDRTAASKAPAATPAADVATLTVTPQRLAISTELPGRL
EAARIAQVRARVPGIVLQRVFREGSDVKAGDVLFRIDDAPFQANHQSAQAALAKAEANLA
QVSLKAQRYAALVETNAISKQEYDDISAGQKQAAADVATAKAALASARLNLGHATVTAPI
SGRIGRAQVTEGALVGQNEATPLAIVQQLDPIYVNLTQSSAEVLQLRQALAAGQIKGVGR
DEAKVSLLLEDGRPYPHPGKLLFSDISVDESTGAVVLRAAFPNPDRLLMPGLFVRARLEQ
AVSENAIVVPQQAVQRSADGASVMLVDAGGKVIPRKVRADRSQGDSWVVSEGLQAGDRVI
VEGMQKAKAGTVVNAVAWTGAGSNGGASGKPAVLQAKAPR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcccggtcgcctgaccccgattgcactgatcatcactgctatcctgcttact
gcctgccttgatcgtaccgcagccagcaaggcccctgccgccacgccggcggcagacgta
gccaccctcacggtgacaccgcagcgactggccatcagcaccgaattgcccggccgcctg
gaagccgcacgcatcgctcaggtacgggcgcgcgtgcctggcatcgtgctgcaacgcgtt
ttccgcgaaggcagcgacgtcaaggccggcgacgtgctgttccgtatcgatgacgcaccc
ttccaggcaaatcaccaaagcgcacaggcggcactggccaaggccgaggccaacctcgcc
caggtcagcctgaaagcacaacgttatgcagcgctggtggaaaccaatgccatcagcaag
caggaatacgacgatatcagcgcggggcaaaaacaggcagcggccgacgtcgccacggcc
aaggcggcgctggcgtccgcccgactgaacctcggacacgccaccgtgactgcgccgatc
agcggccgcatcggccgcgcccaggtgaccgaaggcgcactggtcggccagaacgaggca
acgccgctggccatcgtccagcagctcgatccgatctatgtcaacctgactcagtccagc
gcagaggtattgcaactgcgccaggcgctggcagccggccagataaaaggggtaggccgc
gacgaagccaaggtcagcctgctactggaagatggccgcccttatccgcatccgggcaag
ctgctgttttccgatatctcggtcgatgaaagcacgggtgctgtggtgctgcgcgcggcc
ttccccaatccggatcgtctgctgatgcccgggcttttcgtacgcgcacgcctcgaacag
gccgtcagcgaaaacgccatcgtcgtgccgcagcaagcggtgcagcgcagcgccgacggg
gccagcgtgatgctggtggatgccggcggcaaggtcatcccgcggaaagtccgggccgac
cgaagccagggcgattcctgggtcgtcagcgaaggcttgcaggcaggcgaccgcgtgatc
gtcgaaggcatgcagaaagccaaggcgggcacggtggtcaacgcggttgcctggactggc
gctggcagcaatggcggcgccagtggcaagcctgctgtcctgcaagccaaggccccacgc
taa
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