Janthinobacterium sp. 17J80-10: EKL02_04870
Help
Entry
EKL02_04870 CDS
T05896
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj01501
beta-Lactam resistance
jaj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EKL02_04870
01503 Cationic antimicrobial peptide (CAMP) resistance
EKL02_04870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jaj03036
]
EKL02_04870
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jaj02000
]
EKL02_04870
01504 Antimicrobial resistance genes [BR:
jaj01504
]
EKL02_04870
Chromosome and associated proteins [BR:
jaj03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EKL02_04870
Transporters [BR:
jaj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EKL02_04870
Antimicrobial resistance genes [BR:
jaj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EKL02_04870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND_2
YknX_C
BSH_CusB
BSH_CzcB
CzcB_C
HH_MFP_RND
Biotin_lipoyl
BSH_YknX
BSH_Fcp1
Beta-barrel_AprE
HH_YBHG
HH_CyaD
Beta-barrel_ALG44
YqfD
BSH_LcnD
BSH_YhbJ
HH_CzcB
MoeA_C
HH_AprE
PTS_EIIA_1
Beta-barrel_RND
TP096X_C
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
QAU33567
LinkDB
All DBs
Position
complement(1085948..1087141)
Genome browser
AA seq
397 aa
AA seq
DB search
MLKRRTIWILALAGLLALGAGAVAMKKRQAAAPVQPPLTKAPPALEFLPGDITQVQPHEL
RQVLQLSGALRAVNQAQVKAKVAGEVREVLVREGEAVKAGQVLVKIDASEYQARLEQARG
SLHAARAQLAIATKARENNRALVAKGFISQNAFDNAASQYDIAHANVESAQGALDVAQKA
LTDSVVRAPIAGVVASRSVQPGEKVSVDGRLLDLVDLRQLELEAAVPTTDILQIAPGQQA
EVRLEGLPAALTGRIVRINPLTQAGSRSVMTFIQVDNPQGMLKAGMFGQALITLTSKPGV
LSVPPGAIQDQAGSTVVYAIADGELRQQRVKVGMRGNDGKGEAVEILEGLAAGSLIVNSN
LGKLPEGVKVRLAQGGQIAPSPPRAATTTVSATPAAR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcgacgcacaatctggatcctggcgctggcaggcttgctcgcactcggcgca
ggcgccgtggcaatgaaaaaacgccaggctgccgcaccggtccagccccccctgaccaag
gcgccacctgcgctggaattcctgccgggcgatatcacgcaagtgcagccgcacgaattg
cgccaggtgctgcaattgtcgggcgcgctgcgcgccgtcaaccaggcgcaagtcaaggcc
aaggtggccggcgaagtccgtgaagtgctggtgcgcgaaggcgaagcggtaaaagctggc
caggtgctggtaaaaatcgacgccagtgaataccaggcgcgcctggaacaggccaggggc
agcctgcacgctgcgcgcgcccagctggccatcgccaccaaggcccgcgaaaataatcgg
gcgctggtcgccaagggcttcatttcgcaaaatgccttcgataacgctgccagccagtac
gacatcgcccatgccaacgtcgaatccgcgcagggcgcactggatgtggcgcaaaaagcc
ctgaccgacagtgtcgtgcgcgcgccgattgccggggtagtggcaagccgctcggtgcag
ccgggcgaaaaggtttcggtcgatggccgcctgctggatctggtcgacctgcgccagctg
gaactggaggcggcagtgccaaccactgacatcctgcagattgcgcccggccagcaagcc
gaggtgcggctggaaggcttgcctgccgcgctgaccggcaggatcgtgcgcatcaacccg
ctcacccaggcaggatcgcgctcggtcatgacgtttatccaggtcgacaatccgcaaggc
atgctgaaagccggcatgtttggccaggccctgatcacgctgaccagcaagccaggcgta
ctgagcgtccctccaggcgccatccaggatcaggccggcagcacggtggtatacgccatt
gccgatggcgaattgcgtcagcaacgcgtgaaagtcggtatgcgcggcaatgatggcaaa
ggcgaagccgtggaaatcctggagggccttgcggccggcagcctgattgtcaacagcaat
ctcggcaaattgccggagggcgtcaaggtgcgcctggcacagggtggccagatcgcgcca
tcgcctcctcgcgcggctacgacaaccgtcagtgccacgccggcggcgcgctga
DBGET
integrated database retrieval system
