Jannaschia sp. CCS1: Jann_2504 Help Entry Jann_2504         CDS       T00330                                  Name (GenBank) DNA ligase NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism jan  Jannaschia sp. CCS1 Pathway jan03030   DNA replication jan03410   Base excision repair jan03420   Nucleotide excision repair jan03430   Mismatch repair Brite KEGG Orthology (KO) [BR:jan00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Jann_2504    03410 Base excision repair     Jann_2504    03420 Nucleotide excision repair     Jann_2504    03430 Mismatch repair     Jann_2504  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:jan03032]     Jann_2504    03400 DNA repair and recombination proteins [BR:jan03400]     Jann_2504 Enzymes [BR:jan01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Jann_2504 DNA replication proteins [BR:jan03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Jann_2504 DNA repair and recombination proteins [BR:jan03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Jann_2504    NER (nucleotide excision repair)     GGR (global genome repair) factors      Jann_2504    MMR (mismatch excision repair)     DNA ligase      Jann_2504   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Jann_2504 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT MutL Nlig-Ia Motif Other DBs NCBI-ProteinID:  ABD55421 UniProt:  Q28PE1 LinkDB All DBs Position complement(2503013..2505271) Genome browser AA seq 752 aa AA seqDB search MSQPDQEAQALAAGFSADAAKTRLAELAKRLSDANTAYHAADAPDLSDADYDALKRENAA IEAAFPDLKRADSPSDQVGAAPAEGFSKLTHTQRMLSLANAFDAGDVPDFVAGIRRYLNL GAEADLPFTAEPKIDGLSLSLRYEDGQLVSAATRGDGAIGENVTANARTIDDIPQTLTDA PDVLEVRGEVYMSHADFAALNDRQAEAGAKTFANPRNAAAGSLRQLDASITRSRPLRFFA YAWGEVSAPLAATQSGALNTLKTLGFQINDRTKTCHSAEDMLAHYASIEQDRADLGYDID GVVYKIDDLDYQRRLGMRSTTPRWAIAHKFPAELAWTTLEAIDIQVGRTGALSPVARLTP VTVGGVVVSNATLHNEDYIAGRDANGGPIRDGKDIRVGDRVQVYRAGDVIPKVADVDLAK RPENTAKYAFPDHCPQCQSEAIREEGDAVRRCTGGLICPAQAVEKLKHFVSRAAFDIDGL GAKQVEAFYLDGWIAEPADIFRLKENYGEGMKQLRNREGWGEKSATSLFNAIDDKRSIAL HRLIFALGIRHVGEVAASDLARHFTTWKALAEIVDQAAPAAEAHRRAEDAVLAERKAAAD EGRRASLQPQRDKAWADTPEPAKAAWDDLTGIDGIGATVAVSLVTTFQQARERASIDRLI TELTDIQPPEARATQSAVAGLTVVFTGALERMTRAEAKARAEAMGAKVSGSVSAKTDIVV AGPGAGSKEKKAKDLGIELLTEEQWLDRIGDA NT seq 2259 nt NT seq  +upstreamnt  +downstreamnt atgtcacaaccagatcaagaggcgcaggcgctggccgccggtttttcggcagacgcggcc aaaacacgtctggcggaactggcaaagcgcctctcggacgccaacactgcctaccacgcc gcagacgccccggatctgagcgatgccgattacgacgccctgaagcgagagaatgccgcg atcgaggccgcatttccggacctcaagcgcgccgacagtcccagtgatcaggtcggtgcg gcccctgcggaggggttctcgaaactcactcacacccaacgcatgctgtcgctcgccaac gcgtttgacgcgggcgatgtccctgattttgtggcaggtattcgtcgctacctgaacctt ggcgcggaggcggatcttcccttcaccgccgagcccaagattgacgggctgtcgctgtca ctgcgatacgaggacggccagctggtctctgcggccacaaggggcgacggggccatcggc gaaaacgtcacggcaaatgcgcgcaccatcgatgatattccgcaaaccctgacggatgcg ccagacgttcttgaggtgcggggcgaggtctacatgagccacgcggacttcgccgctctg aacgaccgccaggcagaggccggggccaagaccttcgccaatccgcgcaacgccgccgcc ggatcgctgcggcagttggatgcctccatcacccgatcccgcccgctgaggttcttcgcc tacgcctggggagaggtgagtgcgccccttgcggccacccaatcgggcgcgctcaacacg ctgaaaacacttggattccagatcaacgaccgcaccaagacgtgccatagcgccgaggac atgctggcccattatgcgagcattgagcaggaccgtgccgatctgggctatgacatcgac ggcgtggtctacaagatcgacgatcttgactatcagcgcagacttggcatgcggtccacg acgccgcgatgggcgattgcccacaaattcccggctgaactggcctggaccacgttggaa gccatcgacattcaggttggccgcaccggtgcgctcagccccgtggcgcgcctgacgcct gtgacggtcggcggcgttgttgtgtccaacgccacgctgcacaatgaagactatattgcc ggccgcgatgcgaacggaggtcccatccgggacggcaaggacatccgcgtcggcgaccgt gttcaggtctaccgcgcgggcgacgtgatcccgaaggtcgctgatgtagacctcgcaaaa cgccccgaaaacacagcgaaatatgcctttccggaccattgcccccagtgccagtccgag gcgatccgggaggagggcgatgccgtgcgtcgctgcaccggcggcctgatctgcccggcg caggctgtggaaaagctgaagcatttcgtcagtcgcgcggcgtttgacatagatgggctc ggcgccaaacaggtggaggccttctaccttgatggctggattgccgaacccgcagacatc ttccgcctgaaggagaattatggcgagggcatgaaacaactcaggaaccgcgaggggtgg ggcgagaaatcggcgaccagcctgttcaacgcaatcgacgacaaacgcagcatcgcgttg catcgtctgatcttcgcgctcggtatccgccatgtgggggaggttgcggcctcggacctt gcgcgccatttcacgacgtggaaggccttggcagagatcgtggaccaagccgcgcccgcc gccgaggcgcatcgccgcgcggaagacgccgtcctggccgagcggaaggccgccgccgat gagggccgccgcgcctccctgcaaccccaacgcgacaaggcctgggccgacacgccggag cctgcaaaggcagcctgggacgacctgaccggcatcgacggcatcggtgcgacggtcgcg gtgtcactggtcacgaccttccagcaggcccgcgagcgcgcctccatcgaccgtctgatc acggaactcaccgatatccagccgcctgaggcccgcgcgacccaaagtgcggttgcgggc ctcaccgtggtttttacgggcgcactggagcgcatgacgcgggcggaggccaaggcccgg gcagaggcgatgggcgccaaggtctcaggctccgtttccgccaagacagatatcgttgtg gcgggaccgggggcggggtcaaaagagaagaaagccaaggatttagggattgaacttctg accgaagaacaatggctggaccgcatcggcgatgcctga

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