Jeotgalibaca arthritidis: G7057_07320
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Entry
G7057_07320 CDS
T06477
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
jar
Jeotgalibaca arthritidis
Pathway
jar03030
DNA replication
jar03410
Base excision repair
jar03420
Nucleotide excision repair
jar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G7057_07320 (ligA)
03410 Base excision repair
G7057_07320 (ligA)
03420 Nucleotide excision repair
G7057_07320 (ligA)
03430 Mismatch repair
G7057_07320 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jar03032
]
G7057_07320 (ligA)
03400 DNA repair and recombination proteins [BR:
jar03400
]
G7057_07320 (ligA)
Enzymes [BR:
jar01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
G7057_07320 (ligA)
DNA replication proteins [BR:
jar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G7057_07320 (ligA)
DNA repair and recombination proteins [BR:
jar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
G7057_07320 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G7057_07320 (ligA)
MMR (mismatch excision repair)
DNA ligase
G7057_07320 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G7057_07320 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH
DNA_photolyase
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
QII83159
UniProt:
A0A6G7KD16
LinkDB
All DBs
Position
1430695..1432734
Genome browser
AA seq
679 aa
AA seq
DB search
MKKLTLIEAEKRVAELRQSLQTYSHAYYVLDQPLISDAEYDKLYHELVAIETDYPELITK
ESPTQRVGGQILPGFEKVSHDVPMLSLGNAFNKEDLLAFDQRVKKLTDQPIRYICELKID
GLAVSLRYENGVFERGATRGDGVIGEDITQNLRTVKAIPLRLNKPYSFEVRGECYMPKAS
FAKLNEERDEKGQDIFANPRNAAAGSLRQLDSRVTARRNLSIFLYGAADFAELAVESQSH
LLKELAELGLRTNPQHQVYESMEDVWTFIEEMTTKRLDLSYDIDGIVIKVDQFTAQEEIG
YTVKAPRWAIAYKFPAEEKETLLRDIEWTVGRTGVVTPTAVMDPVFIAGSTVQRASLHNV
DLLKEKDVRLGDTVVIHKAGDIIPEILHVVLDKRPEDSVPYPIPERCPDCDSQLAHLEEE
VALRCLNPKCPAQMKEGLSHFVSRNAMDISGLGVRVVSQMYEKGLVKDLADLYTLTMEQL
LTLDKVKEKSATNILTAIAESKSNSVERLIFGLGIRNVGSKAARMLAEAFDSIDNLMTAT
KEEIAAIEGFGDIIAESVVAFFSLEEVHDLIESFRSNGVNLTFKGRRPTATISEEASVWA
GKTVVLTGKLTRYNRQEATEMIESLGGKVTGSVSKKTDILVAGEDAGSKLTKAQSLDVAV
WTEEEMLQHLERSETSENE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaactttaatagaagctgaaaaacgcgtagcagaattacgtcaaagctta
caaacatacagtcatgcctattatgttctggatcaaccacttatttctgatgctgaatat
gacaagctttaccatgaattagttgctatcgaaaccgattatccagaactgatcactaag
gaatccccaacccagcgcgttggtgggcagattttacccggatttgagaaagttagtcat
gatgtgccgatgttgagtcttggtaatgcctttaataaagaagacttactggcttttgac
caacgggtgaagaagctaaccgatcaaccgattcgctacatttgtgaattgaaaattgac
ggcttagcggtttcgcttcgttatgaaaatggtgtttttgaaagaggagcaactagagga
gatggcgttattggtgaagatattacgcaaaacttgcgtaccgtcaaagccattccctta
cgccttaacaagccttactcctttgaagtaaggggcgaatgttatatgcccaaagcgtca
ttcgctaagttaaatgaagaacgcgatgaaaaaggacaagatatttttgccaatccaaga
aatgctgcagcaggttcgctgcgtcaattggattctcgtgtgacggccaggcgtaactta
agtatcttcctatatggagcggcagattttgctgaattagctgttgagtcgcaatctcat
ctgctaaaagagttagctgaactgggattacgaacgaatccacagcaccaagtctacgaa
tcaatggaagatgtttggacttttatcgaagagatgacgaccaagcgactagacttgtct
tatgatattgacggcatcgtgattaaagtggaccagtttactgctcaagaagaaattggc
tataccgtaaaagcaccacgctgggcaattgcttataaatttccagctgaagaaaaagaa
acgctgcttcgtgacattgagtggacagttggccgtacaggcgttgtcacaccaactgct
gtgatggaccctgtgtttatcgcaggttcaaccgtgcaacgagcgagcttacataatgtg
gatttattaaaagagaaggatgtccgcttaggtgacacggttgtgattcataaggctggc
gatattattcctgaaattttacatgttgttttagataaacgaccagaagatagcgtccct
tatccgattcctgagcgctgtccagattgtgacagtcagctagctcatttggaggaagaa
gtagcattacgctgcttgaatcctaaatgtcctgctcagatgaaggaaggattgtctcat
tttgtctcccgtaatgcgatggacattagcggattaggtgtgagagttgtgagccaaatg
tatgaaaaaggactcgttaaagacttggcagacctctatacattgactatggaacaattg
cttaccttagataaagtaaaagaaaaatcagcgactaatattttaacggctattgctgaa
agtaagagtaattcagtggagcgattaatttttggtttaggtattcgtaatgttggttca
aaagcagctcgtatgctggcggaagcctttgacagtatcgataacctcatgactgctact
aaggaagagatagcagctattgaaggctttggtgatattatcgccgagagcgtggttgct
ttctttagcctagaggaagtgcatgacttgattgagtccttccgcagtaatggtgttaac
ttgacctttaaaggcagacgacctacagcgactattagtgaagaagcatcggtttgggca
ggcaagactgtcgttctaaccggtaagttgacacgttataaccgtcaggaagccacagag
atgattgaaagcttaggcggaaaggtaaccggtagtgtttcaaagaaaacagacatattg
gttgctggagaagatgcaggtagcaaattaaccaaggcccagtcacttgatgttgccgtt
tggacggaagaagagatgctacagcacttagaaagaagtgaaacaagtgaaaatgaatag
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integrated database retrieval system
