Janthinobacterium tructae: FJQ89_23305
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Entry
FJQ89_23305 CDS
T06359
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
jas
Janthinobacterium tructae
Pathway
jas03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FJQ89_23305 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jas03400
]
FJQ89_23305 (nth)
Enzymes [BR:
jas01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FJQ89_23305 (nth)
DNA repair and recombination proteins [BR:
jas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FJQ89_23305 (nth)
Prokaryotic type
FJQ89_23305 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QDG73022
UniProt:
A0A4Y6RJ37
LinkDB
All DBs
Position
complement(5293369..5294016)
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AA seq
215 aa
AA seq
DB search
MNAAKRLEIFTRFRAANPSPKTELEYTTPFELLIAVLLSAQATDVSVNKATRLLYPVANT
PAKILALGVDELASYIRTIGLFRTKAKNVIATCQILLEQHGGEVPRDRASLEALPGVGRK
TANVVMNTAFGEPTMAVDTHIFRVSNRTGIAPGKNVDIVEQKLLKFIPKEFLHDAHHWLI
LHGRYTCTARKPQCWNCMIADLCDYKSKSPMPAVV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccaaacgcctggaaatctttacgcgctttcgcgccgccaatccgtcgcca
aaaacggaactcgaatacacgacgccgttcgagctgctgatcgccgtgctgctgtcggcg
caggcgacggacgtgtccgtcaacaaagccacccgtttgctgtatccggtcgccaatacg
ccagccaagatactggccctgggtgtcgatgagctggccagctacatccgcaccatcggc
ctgttccgcaccaaggccaagaacgtcatcgccacctgccagatcctgctggaacagcac
ggcggcgaagtgccgcgcgaccgcgcctcgctggaagccttgcccggcgtgggccgcaag
acggcgaatgtggtcatgaacacggcgtttggcgaaccgaccatggcggtcgacacgcat
atcttccgcgtctcgaaccgcaccggcatcgcgccgggcaagaatgtcgatatcgtcgag
caaaaactgttgaaattcatacccaaggaattcctgcacgacgcccaccactggctcatc
ttgcacggccgctacacatgcacggcgcgcaaaccgcaatgctggaactgcatgattgcc
gacttgtgcgattacaagagcaaatcgccgatgccggccgtggtgtag
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