Jatrophihabitans sp. GAS493: SAMN05892883_2555
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Entry
SAMN05892883_2555 CDS
T11165
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
jat Jatrophihabitans sp. GAS493
Pathway
jat00020
Citrate cycle (TCA cycle)
jat00630
Glyoxylate and dicarboxylate metabolism
jat00785
Lipoic acid metabolism
jat01100
Metabolic pathways
jat01110
Biosynthesis of secondary metabolites
jat01120
Microbial metabolism in diverse environments
jat01200
Carbon metabolism
jat01210
2-Oxocarboxylic acid metabolism
Module
jat_M00009
Citrate cycle (TCA cycle, Krebs cycle)
jat_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SAMN05892883_2555
00630 Glyoxylate and dicarboxylate metabolism
SAMN05892883_2555
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SAMN05892883_2555
Enzymes [BR:
jat01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
SAMN05892883_2555
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
SAMN05892883_2555
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
SAMN05892883_2555
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
SAMN05892883_2555
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
2-oxoacid_dh
Transket_pyr
2-oxogl_dehyd_N
DUF2501
Motif
Other DBs
NCBI-ProteinID:
SOD73265
LinkDB
All DBs
Position
I:complement(2694511..2698317)
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AA seq
1268 aa
AA seq
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MVQPQKCGLQLNLSNGFITQGGRTNVATNQSTGNESTAVVTNDFGANEWLVEEMYDRYRE
NPASVDPAWHEFFADFRPGGVLGTPADAAQPVAAPAPAPAGGLPAESPAPRPASHAAPAA
DEGEPRSEERTPSRSDAAPQARVTNPTPTPKAAAPVSPSPSDGPHEMVLRGAAARVVTNM
EGSLAVPTATSVRAVPAKLIADNRVVINNHLRRGRGGKVSFTHIIGYAIVKALASTPQMN
NFYAEINGKPNVVTPEHVNLGIAIDLVNKDGSRALVVASIKAAETLDFAGFWSAYEDIIR
RARAGKLTADDFAGTTISLTNPGTIGTNHSVPRLMSGQGTIVGVGAMEYPAEFSGMSPEG
LTERAISKIMTLTSTYDHRIIQGAQSGEFLRQIHQALLADDFYDEIFAALRIPYQPIRWM
VDRDVSHEGQIDKSARVIELINAYRANGHLMADTDPLEFTVRTHPDLDITRHGLTLWDLD
REFPVGGFAGEKLMKLRDVLGVLRDAYCRRVGVEYMHIIDPEQRRWLQSRIEVASPPPNR
EEQLHILGRLNVAEALETFLQTKYVGQKRFSLEGAETVIALCDAILSQAAEQGLEEVVIG
MPHRGRLNVLANIVGKPYAKIFNEFEGNIDPGTAQGSGDVKYHLGAEGVFETANGKTIDV
SLTANPSHLEAVDSVLEGIVRAKQDVLNKGEDGFTVLPLMMHGDAAFAGQGVVAETLNLS
QLRGYRTGGTVHVVVNNQVGFTTSPTSSRSSLYCTDVARMISAPIFHVNGDDPEACVRVA
KLAVEFRREFKKDVVIDMVCYRRRGHNEADNPSFTQPLMYDIIDAKRSVRKIYTEALVGR
GDITLSDAEAALKDFQSQLEKVFLETRNATGKSTPEPELDHLNPTQSVTTATSMETIKRI
ADAYANPPEGFTIHPRLKPQIDRRVAMASNGAVDWATAELFAFGALVLEGRAVRLAGQDS
RRGTFTQRHAVLIDRSDGEEYTPLRYLAEDQAPFWVYDSLLSEFAAMGFEYGYSVVRDDA
LVCWEAQFGDFADGAQTIIDEFIASGEAKWGQRSAVSLLLPHGYEGQGPDHSSGRPERFL
QLSAENNMTVAICSTPANYFHLLRRQGLSPVRRPLVAFTPKSLLRLKAAVSQLDDFTNGS
FQPVIGDSTVDPAAVRRVVLCSGKVYYDLVAAREARQDVAIVRVEQLYPLPADEIRAELA
RYGDVELIWAQEEPANQGAWPFIALNLPEHLDGRRLGRASRKASASPAVGSSRVHEAQQH
DVVASALG
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggttcagccgcagaaatgcggcctccaactcaatctatccaacggatttatcacccaa
ggcggccggacgaacgtggcgaccaatcagtccacaggcaacgaaagcacagcagtagtc
accaacgacttcggcgcgaacgagtggctcgtcgaggagatgtacgacagataccgggag
aatccggcgagtgtcgacccggcgtggcacgagttcttcgccgacttccgccccggtggc
gtgctcggcacgccggccgacgcggcccagcccgtcgccgcaccggcaccggcaccggcc
ggtgggttgcccgccgagtcacccgccccccgcccggcatcgcatgccgcgccggccgct
gacgaaggtgaaccgcgctccgaagagcgcactccgagccgttcggacgccgcacctcag
gctcgtgtgaccaaccccacaccgacgccgaaggcggccgcaccagtctcccccagccca
tcagacggaccgcacgagatggtcctgcggggtgccgcggcccgcgtcgtcaccaacatg
gagggctcgctggccgtcccgacggccaccagcgtgcgagccgtgccggcgaagttgatc
gccgacaaccgcgtcgtcatcaacaaccacctgcgccgcggccgcggtggcaaggtcagc
ttcacccacatcatcgggtacgcgatcgtcaaggcactggccagcaccccgcagatgaac
aacttctacgccgagatcaacggcaagccgaacgtggtcacgcccgaacacgtgaacctc
ggcatcgccatcgacctggtcaacaaggacggctcccgggccctcgtggtggccagcatc
aaggcggccgagacgctcgacttcgctggattctggtcggcctatgaggacatcatccgc
cgtgcccgggccggaaaactgaccgccgacgatttcgcaggcaccaccatcagcctcacc
aacccgggcacgatcggcaccaatcactcggtgccgcgactgatgagcgggcagggcacg
atcgtcggtgtcggcgcgatggagtacccggccgagttcagcggcatgagccccgagggc
ctcaccgaacgcgcgatcagcaagatcatgacgctcacctcgacctacgaccaccgcatc
attcagggtgcccagtccggcgagttcctccgtcagatccaccaggcgctgctggccgac
gacttctacgacgagatcttcgccgcgctgcgcatcccgtaccagccgattcgctggatg
gtcgaccgggacgtcagccacgagggtcagatcgacaagagtgcgcgggtcatcgaactg
atcaacgcctaccgggccaacggccacctgatggccgacaccgacccgctcgaattcacc
gtgcgcacccacccggacctcgacatcacccggcacggcctcaccctctgggacctcgac
cgtgagttcccggtcggcggcttcgccggcgagaagctgatgaagctgcgcgacgttctc
ggcgtgctgcgcgatgcttactgccgccgggtcggcgttgagtacatgcacatcatcgac
cccgagcagcggcgctggttgcagtcgcgcatcgaggtggcgagcccgccaccgaaccgc
gaggagcagctgcacatcctcggccggctcaacgtcgccgaggccctggagaccttcctg
cagacgaagtacgtcgggcagaagcggttcagccttgagggtgctgagacggtcatcgcg
ctctgcgatgcgatcctctcccaggccgctgagcagggcctggaggaggtcgtcatcggc
atgccgcaccgcggccggctcaacgtgctggccaacatcgtcggcaagccgtacgcgaag
atcttcaatgaattcgagggaaacatcgacccgggcaccgcccagggctcgggcgacgtg
aagtaccacctcggcgccgaaggcgtcttcgagacggccaacggcaagaccatcgacgtg
tcactcaccgccaacccctcgcacctggaggcggtggactcggtgctggagggcatcgtc
cgggccaagcaggacgtcctcaacaagggcgaggacggcttcaccgtgctcccgctgatg
atgcacggtgacgcggccttcgccggccagggcgtggtggcggagacgctcaatctctcc
cagctgcgcggctaccgcaccggtggcacggtgcacgtcgtcgtgaacaaccaggtcggg
ttcaccacctcaccgacctcgtcgcgttcgagcctctactgcaccgacgtggcccggatg
atctccgcgccgatcttccacgtcaacggtgacgaccccgaggcctgcgtgcgagtggcc
aagctcgcggtggagttccgccgggagttcaagaaggacgtcgtcatcgacatggtctgc
taccgccgccgcggtcacaacgaggccgacaacccgtccttcacccagccgttgatgtac
gacatcatcgacgccaagcgcagcgtccgcaagatctacaccgaggcgctcgtcggtcgc
ggcgacatcaccctctccgatgccgaggcggcgctgaaggacttccagtcgcagttggag
aaggtcttcctggagacccgcaacgcgaccggcaagtcgaccccggagccggagctcgac
cacctcaaccccacgcagagcgtcaccacggcgacgagcatggagaccatcaagcggatc
gccgacgcctacgcgaacccgccggagggcttcacgattcacccacggctcaagccgcag
atcgaccgccgggtcgccatggccagcaacggcgcggtggactgggcaaccgccgagctc
ttcgccttcggcgcactcgttctggagggtcgggcggttcgcctggccggccaggactcg
cggcgcgggacattcacccagcgccacgcggtgctcatcgatcgcagcgacggcgaggag
tacacgccgctgcggtacctggccgaggaccaggccccgttctgggtctacgactcgctg
ctcagcgagttcgccgcgatgggcttcgagtacggctactcggtcgtccgcgacgacgcc
cttgtctgctgggaggcccagttcggtgacttcgccgacggcgctcagacgatcatcgac
gaattcatcgcctccggcgaggccaagtggggacagcgctccgcagtatcgctgctcctc
ccgcacggctacgaggggcaggggccggaccactcctcaggacgtccggagcgattcctg
cagctgtcggccgagaacaacatgacggtcgccatatgctccacgccggcgaactacttc
cacctgctgcgccgccaggggctctcgccggtgcgccggccgttggtcgccttcacgccc
aagtcgctgctgcggctgaaggcggcggtgagccagctggacgacttcaccaacgggtcg
ttccagccggtgatcggtgacagcacggtcgacccggcggcggttcgtcgcgtcgtgctc
tgctcgggcaaggtctactacgacctggtcgccgcccgggaagcacgtcaggacgtggcc
atcgtgcgggtcgagcagctctacccgctgccggccgacgagattcgggccgagctcgcc
cgctacggcgacgtcgagctgatctgggctcaggaggagcccgcgaaccagggcgcctgg
ccgttcatcgcactcaacctgccggagcacctggacggccggcggcttggacgggcgtcg
cgtaaggcctctgcctcaccggcggtcggctcgtcgcgggtccacgaggcgcagcagcac
gacgtggtggcaagcgctctcggctaa
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