Antarcticirhabdus aurantiaca: OXU80_00410
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Entry
OXU80_00410 CDS
T09604
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
jav
Antarcticirhabdus aurantiaca
Pathway
jav01501
beta-Lactam resistance
jav01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OXU80_00410
01503 Cationic antimicrobial peptide (CAMP) resistance
OXU80_00410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jav02000
]
OXU80_00410
01504 Antimicrobial resistance genes [BR:
jav01504
]
OXU80_00410
Transporters [BR:
jav02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OXU80_00410
Antimicrobial resistance genes [BR:
jav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OXU80_00410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WAJ28753
LinkDB
All DBs
Position
103325..106474
Genome browser
AA seq
1049 aa
AA seq
DB search
MRLFDTAVSRPILAASINLLLIAIGLGALFALPIREFPDVDPPTVTVNTTYRGAQAEVVE
REVTRIIEEGLSGVAGVRQIRSTTRDEASDIDLEFEAGADIDAAAADIRDKVSGVRNDLP
DLVEEPIIEKASADDQPMMYLTVRSDEYDTAALTDIVDRTVVDAIGAVSGVSQIQIGGEK
RYAMRIWLDRRAMAARGVTASDVSARLEAENVELPAGEIETPTQAITLRADTRFTSAQDF
AELSLIDRQGDRVRLGDVARVEVGVEDQDSGFRVDGQDAISLGIIRQSNANTLDIAAGII
AELDSVRGQIPASVSIDVGYNEAVFIRENLKNVGTTLLQTVAVIVVVIFVFLGSIRSTVV
PAATIPASIIPAAAIAATMGFSLNTLTILAVILAISLCTDDAVVIMENIRRRHQKGEPLL
LASARATRQVGFAVFASALVLIAVILPLAFLEGNVGLLFREFAVVLAAIVAFSTIAALTL
GPMLSSLLFRDRQEPGRMEHFVGRHLDRLGRRYAKALSGAIRHPVLTLLAGAVFVGIGAF
AFASTPAELAPDEDRGAVRVRVEGPEGASTAYMADKLRQLEAVVQDTSGENGPVRSVLSI
LSPGRPGQGQTTVGILIAQLKDWSEREETQMAFVERLQDALPQVTGVRAFAINPNGLGQG
RGRPVSMVVKGPDRAVLDAWAQRIVADGAGIPGLVNLDSDYDDTKPQISIAVDRSRASAL
GVDARAVGETLQIMFGEAEVTRYVDRGEEYEVILQGRPEDRLSPTDIDNVFVRAGTGALI
PLSSLVTRQETGTVRELERLDRQPSITLGANLGPTLSLGDALDRLTEIAEASQPPGTEIA
FTGQSLDYQETGAAVLFILAMILVLVYLLLAGQFESFVHPFVILISAPTALAGGVLILVA
MGQTLNIYSQIAMLLLIGLVAKNAILLVEFANQLREEGAEPFEAAVEAAGQRLRPILMTT
LATIIGAVPLILESGAGAEGRITVGAVIASGTTLGTVLTLFVVPTLYVALARFTAPRNAR
EAKLAELERAHPDKGEPSGKEDGLPQPAE
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcttcgacacggccgtttcccgcccgatcctcgccgccagcatcaaccttctc
ctcatcgccatcggcctcggcgccctcttcgccctgccgatccgcgagttccccgacgtc
gatccccccaccgtcaccgtcaacaccacctatcgcggcgcgcaggccgaggtggtcgag
cgcgaggtgacgcgcatcatcgaggagggcctgtcgggcgtcgccggcgtccggcagatc
cgctcgacgacgcgcgacgaggcctccgacatcgacctcgaattcgaggcgggcgccgac
atcgacgcggccgccgccgacatccgcgacaaggtctcgggggtgcgcaacgacctcccc
gacctcgtcgaggagccgatcatcgagaaggcctcggccgacgaccagccgatgatgtac
ctgacggtgcgctccgacgagtacgacacggccgcgctcaccgacatcgtcgaccgcacc
gtggtggacgccatcggcgccgtgtccggcgtctcgcagatccagatcggcggcgagaag
cgctacgccatgcgcatctggctcgaccgccgcgccatggccgcccggggcgtcaccgcc
tccgacgtttcggcgcggctggaggcggagaacgtcgagctgccggcgggcgagatcgag
acgccgacgcaggccatcacccttcgcgccgacacgcgcttcacctcggcgcaggacttc
gccgagctttccctgatcgaccggcagggcgaccgcgtgcggctcggcgacgtcgcccgc
gtcgaggtcggcgtcgaggaccaggattcgggctttcgcgtcgacgggcaggacgcgatc
tcgctcggcatcatccgccagtccaacgccaacacgctggacatcgccgccggcatcatc
gccgagctggactccgtgcgcggccagatcccggcctccgtgtcgatcgacgtcggctac
aacgaggccgtcttcatccgcgagaacctgaagaacgtcgggacgaccctcctccagacg
gtggccgtcatcgtcgtcgtgatcttcgtctttctcggctcgatccgctcgacggtcgtg
ccggccgccaccatccccgcctcgatcatcccggccgccgcgatcgccgcgaccatgggc
ttctcgctgaacacgctgacgatcctcgccgtgatcctggcgatcagcctgtgcaccgac
gacgccgtcgtgatcatggagaacatccgccggcgccatcaaaagggcgagccgctgctc
ctcgcctccgcccgcgcgacgcgccaggtcggcttcgcggtcttcgcgagcgccctcgtc
ctcatcgccgtgatcctgccgctcgccttcctggaaggcaacgtcggcctcctgttccgc
gaattcgcggtcgttctcgccgccatcgtcgccttctcgacgatcgccgcgctgacgctg
gggccgatgctctcctcgctcctgttccgcgacaggcaagaaccgggccgcatggagcac
ttcgtcggccggcacctcgaccggctcgggcgccgctatgccaaggcgctgtccggcgcg
atccgccaccccgtcctgacgctgctcgccggcgccgtcttcgtcggcatcggcgccttc
gcctttgcgtccaccccggccgagctcgcgcccgacgaggatcgcggcgcggtgcgggtg
cgcgtcgaggggccggagggcgcatccaccgcctatatggccgacaagctgcggcagctc
gaagcggtcgtccaggacacctccggcgagaacgggccggtacgctcggtcctgtccatc
ctgtcccccggccgtcccggccagggccagaccaccgtcggcatcctcatcgcccagctc
aaggattggtcggagcgcgaggaaacgcagatggccttcgtggagcgcctccaggacgcg
ctgccgcaggtgacgggcgttcgcgccttcgcgatcaatccgaacggcctcggccagggc
cgcgggcggcccgtctccatggtggtgaaggggccggaccgcgccgtcctcgacgcctgg
gcgcagcggatcgtcgcggacggcgccggcattcccggcctcgtgaacctcgactccgac
tacgacgacaccaagccgcaaatctccatcgcggtcgaccgctcccgggccagtgccctc
ggcgtcgacgcgcgcgccgtcggcgaaaccttgcagatcatgttcggcgaagcggaggtg
acgcgctacgtcgaccgcggcgaggaatacgaggtgatcctgcaggggcgccccgaggac
cgcctgtcgccgaccgacatcgacaacgtcttcgtgcgggccggcaccggcgcgctgatc
cccctgtcgagcctcgtgacgcggcaggagacgggcacggtgcgcgagctggagcggctc
gaccgccagccctcgatcaccctcggcgccaatctcggtcccaccctctcgctcggcgac
gcgctggaccggctgacggaaatcgcggaagccagccagccgcccggcaccgagatcgcc
ttcaccggccagagcctcgactaccaggagacgggcgcagccgtcctcttcatcctcgcg
atgatcctcgtcctcgtctacctcctgctggccgggcagttcgagagcttcgtccacccc
ttcgtgatcctgatctcggcgccgaccgcgctcgccggcggcgttttgatcctcgtcgcg
atgggccagacgctgaacatctacagccagatcgccatgcttctcctgatcgggctcgtc
gccaagaacgcgatcctgctggtcgaattcgccaaccagctgcgcgaggagggcgccgag
cccttcgaggccgccgtcgaggcggcgggccagcgcctgcgcccgatcctgatgacgacg
ctcgccaccatcatcggcgcggtgccgctgatcctcgaatccggtgcgggcgcggaaggg
cgcatcacggtcggcgccgtgatcgccagcggcacgacgctcggaaccgtcttgacgctc
ttcgtcgtgcccacgctctacgtcgcgctcgcccgcttcaccgcgccccgcaacgcccgc
gaggcgaagctcgccgagctggagcgcgcgcatcccgacaagggcgagccctccggaaaa
gaggacggcctgccgcagccggcggaatga
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