Antarcticirhabdus aurantiaca: OXU80_05240
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Entry
OXU80_05240 CDS
T09604
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
jav
Antarcticirhabdus aurantiaca
Pathway
jav01501
beta-Lactam resistance
jav01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OXU80_05240
01503 Cationic antimicrobial peptide (CAMP) resistance
OXU80_05240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jav02000
]
OXU80_05240
01504 Antimicrobial resistance genes [BR:
jav01504
]
OXU80_05240
Transporters [BR:
jav02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OXU80_05240
Antimicrobial resistance genes [BR:
jav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OXU80_05240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
DUF6286
Motif
Other DBs
NCBI-ProteinID:
WAJ29638
LinkDB
All DBs
Position
complement(1129353..1132421)
Genome browser
AA seq
1022 aa
AA seq
DB search
MNMSTWAIRNPVPPIALFLVLCIAGWVSFMRLPVTQMPNVDIPIVTIAVAQPGAAPSEIV
SQIVRPIETAVGDVTGVRHVSASATDSSANLTIEFAIGTNTDRALNDVKDAVASVRDELP
ESATEPLVQRLDVTGQAILTYAVSDPTRSIQDLSTFVDDVVARDLQLAAGVGRVTRFGGA
ERQILVDLDPDRLLALGLGAADVNAQLVRANINLGGGSGDLAGQEYSIRTLGSAETLEGL
AATAIRLPTGDTVRLDQLGTVSDGASELDSFALLDAQPVVAFGVFRATGASDLLAAENAK
ARLEALSQHYPDVRFALVDDATIYTEASYHSAMDTLYEGAALAVIVVFLFLRDWRATLVT
AVALPLSILPTFIVLDLLGFTLNTVSLLGITLVTGILVDDAIVEIENIVRHMQGGKPAYE
ASEEAATEIGLTVIAISFTIVAVFAPVSFMGGIAGQFFKQFGITVAVAVLFSLLVARLIT
PMFAAYFLRNGHGMGEAKDGWLMRTYLAILGWTLRHRLVTLLAGAMIFAGSIYSATLLPT
EFLPATDTGRARVSVELPPGSLLSETRTVAQEVTARLDDIPEVRSVFVSTDSETAANVQV
DFGQKNERDRSAPEITAEIEERLADIADVRLFVLNENGQRDISINVLGDTQDATAAAARA
LAEEMRTLPQLRDASTDAALVRPEIQITPKPQIAAELGITAASLASTVRTATIGESETNL
AKFNAGDEQIPIVVRLEERARNDLMRIAGLRVPTETGTPVPLVAVADVRLSTGPSSIDRY
DRQYRTSVEADLAEGALLGPATAAVMQLPTTLDMPDGTAMEAGGDVETMNEIFESFALAM
GAGILLVYIVLVLLFSSFITPVTILLSLPLAIGGAIFALYLYGAGIGISVVIGFLMLMGI
VTKNAIMLVEFAIEAMHRGETRAAAMIDAGHKRARPIIMTTIAMAAGMVPSAIGSATGGE
FRAPMAVAVIGGLLLSTLLSLLFVPSLFSVLEGVRSRSRRLLTRMLGFERRGPASPEGRP
VA
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgtccacctgggcgatccgcaacccggtcccgccgatcgccttgtttctcgtc
ctttgcatcgccggctgggtcagcttcatgcgcctgccggtcacgcagatgccgaacgtc
gacattccgatcgtcaccatcgccgtcgcccagccgggcgccgcgccgtccgagatcgtc
agccagatcgtccggccgatcgagaccgcggtcggcgacgtgacgggcgtgcgccacgtc
agcgcgagcgccaccgacagctccgccaatctcacgatcgagttcgccatcggcacgaac
accgaccgggcgctcaacgacgtgaaggacgcggtggcgagcgtgcgcgacgagctgccc
gaaagcgccaccgagcccctggtccagcgcctcgacgtcaccggccaggcgatcctgacc
tatgccgtgtcggacccgacgcgctcgatccaggacctgtcgaccttcgtcgacgacgtc
gtggcgcgcgacctccagctggccgcgggcgtcgggcgcgtcacgcgcttcggcggcgcg
gagcggcagatcctcgtcgatctcgacccggaccgcctcctggcgctcggcctcggcgcg
gcggacgtcaacgcgcagctcgtgcgcgccaacatcaatctgggcggcggcagcggcgat
ctcgccggccaggaatactccatccgcaccctcggctcggccgaaaccctggagggcctc
gccgcgaccgcgatccgcctgccgacgggcgacacggtgcgcctcgaccagctcggcacc
gtcagcgacggggcgagcgagctcgacagcttcgcgctcctcgacgcccagccggtggtg
gccttcggcgtgttccgcgcgacgggggcgagcgacctcctcgcggccgagaacgccaag
gcgcgcctcgaagcgctttcgcagcactatccggacgtgcgcttcgccctcgtcgacgac
gccacgatctataccgaggcgagctaccactcggcgatggacacgctctacgagggcgcg
gcgctcgccgtgatcgtcgtgttcctgttcctgcgggactggcgcgcgaccctggtgacg
gcggtcgccctgccgctgtcgatcctgccgaccttcatcgtcctcgaccttctcggcttc
accctcaacacggtgagccttctcggcatcacgctcgtcaccggcatcctcgtcgacgac
gccatcgtcgagatcgagaacatcgtccggcacatgcaggggggaaagcccgcctacgag
gcctccgaggaggccgccaccgagatcggcctcaccgtcatcgcgatcagcttcaccatc
gtcgcggtcttcgcgccggtgtccttcatgggcggcatcgccgggcagttcttcaagcag
ttcggcatcaccgtcgccgtcgccgtcctgttctcgctgctcgtcgcccggctcatcacg
ccgatgttcgcggcctatttcctgcgaaacggccacggcatgggcgaggcgaaggacggc
tggctgatgcgcacctatctcgcgatcctcggctggaccctgcggcaccggctcgtcacg
ctgctggcaggcgccatgatcttcgcgggctcgatctattcggcgacgcttctgccgacc
gagttcctgcccgcaaccgacacgggccgggcgcgcgtctcggtcgagctgccgccgggc
tcgctcctgtcggaaacgcgaaccgtcgcgcaggaggtgacggcccgcctcgacgacatt
cccgaggtgcgctccgtcttcgtcagcacggattccgaaacggccgcgaacgtccaggtc
gacttcggccagaagaacgagcgcgatcgctccgcgccggagatcaccgccgagatcgag
gagcgcctcgccgacatcgccgacgtccgcctcttcgtcctcaacgagaacgggcagcgc
gacatctcgatcaacgtcctgggcgacacccaggacgccaccgccgcggccgcacgcgcc
ctggccgaggagatgcgcaccctgccccagcttcgcgacgcctcgacggacgccgcgctc
gtgcggccggagatccagatcacgcccaagccccagatcgccgccgaactcggcatcacc
gcggcgagcctcgcctcgaccgtgcgcacggcgaccatcggcgagagcgagaccaacctc
gccaaattcaacgccggcgacgagcagatcccgatcgtggtgcggctggaggagcgcgcc
cggaacgacctcatgcgcatcgcgggcctgcgcgtgccgaccgagaccggcacgcccgtg
ccgctcgtcgcggtggcggacgtgcgcctgtccaccggcccgagctcgatcgatcgctac
gaccgccagtaccgcacgagcgtcgaggcggacctcgcggagggcgccctgctcggcccg
gcgaccgcggccgtgatgcagctgccgacgaccctcgacatgccggacggcaccgcgatg
gaggccggcggcgacgtcgagacgatgaacgagatcttcgaaagcttcgccctcgccatg
ggggccggcatccttctcgtctacatcgtcctcgtcctcctcttctcgtccttcatcacg
cccgtcacgatcctcctttcgctgccgctcgccatcggcggggcgatcttcgcgctctac
ctctacggcgcgggcatcggcatctcggtggtgatcggcttcctgatgctgatgggcatc
gtcaccaagaacgcgatcatgctggtggaattcgccatcgaggccatgcatcggggcgag
acccgcgccgcggcgatgatcgatgccggccacaagcgggcgcgcccgatcatcatgacg
accatcgccatggccgccggcatggtgccctcggcgatcggcagcgccacgggcggcgag
ttccgcgcgccgatggcggtggcggtgatcggcggcctgcttctctcgacgctgctgtcg
ctgcttttcgtgccctcgctgttcagcgtgctcgaaggcgtccggagccggtcgcggcgg
cttttgacacggatgctcggcttcgagcggcgcggcccggcttcgccggaagggcgcccg
gtcgcgtag
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