Antarcticirhabdus aurantiaca: OXU80_26580
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Entry
OXU80_26580 CDS
T09604
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
jav
Antarcticirhabdus aurantiaca
Pathway
jav01501
beta-Lactam resistance
jav01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OXU80_26580
01503 Cationic antimicrobial peptide (CAMP) resistance
OXU80_26580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jav03036
]
OXU80_26580
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jav02000
]
OXU80_26580
01504 Antimicrobial resistance genes [BR:
jav01504
]
OXU80_26580
Chromosome and associated proteins [BR:
jav03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OXU80_26580
Transporters [BR:
jav02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OXU80_26580
Antimicrobial resistance genes [BR:
jav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OXU80_26580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Biotin_lipoyl_2
HlyD_D23
HlyD_3
CusB_dom_1
FAD_binding_6
Motif
Other DBs
NCBI-ProteinID:
WAJ28336
LinkDB
All DBs
Position
5486529..5487806
Genome browser
AA seq
425 aa
AA seq
DB search
MLLDTRLPIHRAVGLLIAFGILSTLSACTQAETATSPRAAAASPKIGYVTLRPQPVAIQS
DTAGRVVALRTAEIRPQVGGVVMERVFEPGCEVKQGDLLFRLDPKPFEAQLAAAEATLAK
ASAALPSVQAKAERYANLSASTVISQQDKEDAQALFLQTKADIAAAEAAVETARINLGYA
EIRAPIDGIIGTTNVDIGTLLTAGQAASLATIRQLDPIYVDLTESSSNLLRRQAALEEGA
FVSAFGNAAASPQVTLKLPGGTIYGETGTLEARDRFVSESTSTFTVRARFPNPDLTLLPG
QYVRASIEIGSDDEGFLVPQRAVSRNSKGEATASFLTGDDMIETRIIETYTDVGGEWLVT
GGVAEGDRLVVDGFQKIQPGARVSPVEVELDGNGVVRTPDAAGSTALLETSSPGLASALV
AKAQD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctccttgacacccgtcttccaatccatcgtgccgtcgggcttctgattgcattcggg
atactttccacgctgtcggcatgcacgcaggccgagaccgccacatcgccacgtgctgcg
gccgcctcgcccaagatcggatacgtcacgctgcgtccgcagccggtcgcaatccaaagc
gacacggcgggtcgcgtcgtcgccttgcggacggccgagatccgaccgcaggtcggcggc
gtcgtgatggaacgagtgttcgagccagggtgcgaggtgaagcagggagatctgcttttc
cggctcgatccgaagccattcgaagcgcagctcgcggcagccgaggcgacgcttgccaag
gccagcgccgcgcttcccagcgtccaggccaaggctgaacgctacgccaacctgtctgcc
agcaccgtgatcagtcagcaggacaaggaggatgcgcaggcgctgttcctccagacaaag
gctgacatcgcggcagcggaggccgccgtcgagacggctcgcatcaacctcggttatgcc
gaaatccgcgccccgatcgatgggattatcgggaccacgaacgtcgacatcggcacgctt
ctcaccgcaggacaggcagcctccctggccacaatccgccaactcgatccgatctatgtc
gatctcaccgagtcctcgagcaacctccttcggcgccaagccgcgctggaagagggcgca
ttcgtctcggctttcggcaacgcagccgcttccccacaggtcacgctcaaacttcccggc
ggcacaatctacggggagacgggcacgctggaggctcgcgatcgcttcgtttcggagagc
accagcaccttcaccgtccgcgcccgcttcccgaacccggacctcacgcttttgccagga
cagtacgttcgcgcctcgatcgagattggcagcgacgacgaagggtttctcgttccccag
cgcgccgtctcacgcaacagcaagggcgaggccaccgcaagcttcctgacgggtgacgac
atgatcgagacacggatcatcgaaacctataccgacgtcggcggcgaatggcttgtcact
ggtggggttgccgagggcgaccgcctcgtcgtcgacggcttccagaagattcagccggga
gcaagggtctcgccggtcgaggtcgaactcgatgggaacggtgtggttcgaacgccggac
gcggcgggctcgaccgctctgctagagacgagttccccggggttggccagcgcgctcgtg
gccaaggcgcaggactga
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