Antarcticirhabdus aurantiaca: OXU80_28430
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Entry
OXU80_28430 CDS
T09604
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
jav
Antarcticirhabdus aurantiaca
Pathway
jav00020
Citrate cycle (TCA cycle)
jav00785
Lipoic acid metabolism
jav01100
Metabolic pathways
jav01110
Biosynthesis of secondary metabolites
jav01120
Microbial metabolism in diverse environments
jav01200
Carbon metabolism
jav01210
2-Oxocarboxylic acid metabolism
Module
jav_M00009
Citrate cycle (TCA cycle, Krebs cycle)
jav_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
jav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OXU80_28430
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
OXU80_28430
Enzymes [BR:
jav01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
OXU80_28430
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
E1_dh
Transket_pyr
2-oxogl_dehyd_N
DUF6558
Motif
Other DBs
NCBI-ProteinID:
WAJ28677
LinkDB
All DBs
Position
5900808..5903795
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AA seq
995 aa
AA seq
DB search
MSRSPANDTFAQTSFLYGGNADYIEELAARYEADPSSVSEEWRSFFGALGDDKATVVKNA
EGASWQRANWPIAANGELVSALDGNWPEAEKRIEAKVKDKAAQAGAAIDPKAVTQAARDS
VRALMLIRAYRVRGHLHAKLDPLGLAKAADEDYNELSPENYGFTAADYDRPIFIDNVLGV
EFASIRQMVDILERTYCSTVGVEFMHISNPEEKRWIQERIEGPDKGVAFTDQGKRAILNK
LIEAEGFEKFLDVKYKGTKRFGLDGGEALIPALEQIIKRGGQLGLTEIILGMAHRGRLNV
LSQVMGKPHRAIFNEFKGGSFQPEDVEGSGDVKYHLGASADREFDDNKVHLSLTANPSHL
EIVNPVVLGKARAKQDQIAGRTRTEIVPLETRAQVLPLLIHGDAAFAGQGVVAECFGLSG
LRGHRTGGSIHFIINNQIGFTTNPRLSRSSPYPSDVAKMVEAPIFHVNGDDPEAVVFAAK
VAIEYRMLFKKPVVIDMFCYRRFGHNEGDEPGFTQPIMYKTIRGHETTLELYSKKLVSAG
TLSQAEIDERRAEWRRHLDGEFEAGGSYHPNKADWLDGAWTGLRRAETADEPRRGITGVP
IKTLREIGQKLTRVPEGFNLHKTIGRFMDARAKAIESGENIDWATGEALAFGTLLTEGHP
VRLSGQDVERGTFSQRHSVVYDQEDETRYVPLQNLAKGQAAYDVINSMLSEEAVLGYEYG
YSLAEPHALTLWEAQFGDFVNGAQVVIDQFISSGEKKWLRMSGLVMLLPHGYEGQGPEHS
SARLERFLQLCAEDNMQVANITTPANYFHALRRQLKRDFRKPLILMTPKSLLRHKRAVSQ
LSEMTGDTSFHRLLWDDAERNKDASGIKLVKDDKIRRVVMCTGKVYYDLFEEREKRGIDD
VYLLRLEQLYPFPAKALINELSRFKGAEMVWCQEEPKNMGAWSFIDPYLEWVLDHIGAEK
KRVRYAGRQAAASPAAGTMSKHLAQLSAFLEDALG
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcagtccggcgaacgacaccttcgcgcagacctccttcctgtacggcggcaat
gccgactacatcgaggagctggcggcgcgctacgaggccgacccgtcctccgtgtcggag
gagtggcggtccttcttcggcgcgctgggcgacgacaaggccacggtggtcaagaacgcc
gaaggcgcctcctggcagcgcgccaactggccgatcgcggccaacggcgagctcgtctcg
gccctcgacggcaactggcccgaggccgagaagcgcatcgaggccaaggtcaaggacaag
gcggcgcaggccggcgcggcgatcgacccgaaggcggtgacgcaggccgcgcgcgacagc
gtgcgcgccctcatgctgatccgcgcctaccgcgtgcgcggccacctccacgccaagctc
gacccgctcggcctcgccaaggccgcggacgaggactacaacgagctttccccggagaac
tacggcttcaccgccgccgactacgaccgcccgatcttcatcgacaacgtcctcggcgtc
gagttcgccagcatccgccagatggtggacatcctggagcggacctactgctcgacggtc
ggcgtcgagttcatgcacatctcgaaccctgaagagaagcgctggatccaggagcgcatc
gaggggccggacaagggcgtcgccttcaccgaccagggcaagcgcgcgatcctcaacaag
ctgatcgaggcggaaggcttcgagaagttcctcgacgtcaagtacaagggcaccaagcgc
ttcggcctcgacggcggcgaggcgctgatcccggcgctcgagcagatcatcaagcgcggc
ggccagctcggcctcaccgagatcatcctcggcatggcccatcgcggccgcctcaacgtc
ctgtcccaagtcatgggcaagccgcaccgggcgatcttcaacgagttcaagggcgggtcc
ttccagcccgaggacgtcgagggttcgggtgacgtcaagtaccatctcggcgcctcggcc
gatcgcgagttcgacgacaacaaggtccacctgtcgctgaccgccaacccctcgcacctc
gagatcgtcaatcccgtggtgctcggaaaggcgcgcgccaagcaggaccagatcgccggg
cgcacccgcaccgagatcgtgccgctggaaacccgcgcccaggtgctgccgctgctgatc
cacggcgacgcggccttcgccggccagggcgtcgtcgccgagtgcttcggcctgtcgggg
cttcgcggccaccgcaccggcggctcgatccacttcatcatcaacaaccagatcggcttc
acgaccaatccgcgcctgtcgcgctcctcgccctatccgtccgacgtcgccaagatggtc
gaggcgccgatcttccacgtcaacggcgacgatccggaagccgtggtcttcgcggccaag
gtcgcgatcgagtaccggatgctgttcaagaagccggtcgtgatcgacatgttctgctac
cgccgcttcggccacaacgagggcgacgagccgggcttcacgcagcccatcatgtacaag
accatccgcggccacgagacgacgctggagctctactccaagaagctcgtttccgccggc
acgctctcccaggccgagatcgacgagcgccgcgccgaatggcgccgccacctcgacggc
gagttcgaggccgggggcagctaccaccccaacaaggccgactggctggacggcgcctgg
acgggcctgcgccgcgccgagaccgccgacgagccgcgccgcggcatcaccggcgtgccg
atcaagaccctgcgcgagatcgggcagaagctcacccgcgtgccggagggcttcaacctc
cacaagaccatcggccgcttcatggacgcgcgcgccaaggcgatcgagtccggcgagaac
atcgactgggcgaccggcgaggcgctggccttcggcacgctgctgacggaaggccacccg
gtgcgcctgtcgggccaggacgtcgagcgcggcaccttctcccagcgccactcggtcgtc
tacgaccaggaggacgagacgcgctacgtgccgctgcagaacctcgccaaggggcaggcg
gcctacgacgtcatcaactccatgctctcggaagaagcggtgctcggctacgagtacggc
tattccctcgcggagccgcacgcgctgaccctctgggaagcgcagttcggcgacttcgtg
aacggcgcgcaggtcgtcatcgaccagttcatctcgtcgggcgagaagaagtggctgcgc
atgtccggcctcgtgatgctcctgccgcacggctacgaggggcaggggcccgagcactcc
tccgcgaggctggagcgcttcctccagctctgcgcggaggacaacatgcaggtcgccaac
atcacgacgccggcgaactacttccatgcccttcgccggcagctgaagcgcgacttccgc
aagccgctgatcctgatgaccccgaagtcgctgctgcgtcacaagcgggcggtctcgcag
ctctcggagatgaccggcgacacgagcttccaccgcctcctgtgggacgatgcggagcgc
aacaaggacgcgagcggcatcaagctcgtcaaggacgacaagatccgccgcgtcgtgatg
tgcacgggcaaggtctattacgacctcttcgaggagcgcgagaagcgggggatcgacgac
gtctacctcctgcgcctcgagcagctctacccgttcccggccaaggcgctgatcaacgag
ctctcgcgcttcaagggcgccgagatggtgtggtgccaggaggagcccaagaacatgggc
gcctggagcttcatcgatccctatctcgaatgggtgctcgaccatatcggcgccgagaag
aagcgcgtgcgctatgccgggcgccaggcggcggcctcgccggccgcgggcaccatgtcc
aagcacctcgcccagctctccgccttcctggaagacgcgctcggctga
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