Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_14760 Help Entry YQ44_14760        CDS       T04539                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism jaz  Janthinobacterium sp. 1_2014MBL_MicDiv Pathway jaz03030   DNA replication jaz03410   Base excision repair jaz03420   Nucleotide excision repair jaz03430   Mismatch repair Brite KEGG Orthology (KO) [BR:jaz00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     YQ44_14760    03410 Base excision repair     YQ44_14760    03420 Nucleotide excision repair     YQ44_14760    03430 Mismatch repair     YQ44_14760  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:jaz03032]     YQ44_14760    03400 DNA repair and recombination proteins [BR:jaz03400]     YQ44_14760 Enzymes [BR:jaz01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      YQ44_14760 DNA replication proteins [BR:jaz03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      YQ44_14760 DNA repair and recombination proteins [BR:jaz03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      YQ44_14760    NER (nucleotide excision repair)     GGR (global genome repair) factors      YQ44_14760    MMR (mismatch excision repair)     DNA ligase      YQ44_14760   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       YQ44_14760 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD Nlig-Ia PTCB-BRCT BRCT_2 Motif Other DBs NCBI-ProteinID:  APA68850 UniProt:  A0A1I9XYK8 LinkDB All DBs Position complement(3425444..3427810) Genome browser AA seq 788 aa AA seqDB search MTDLTNQDAAARNAAQRVLALTAELNRHLHAYHVLDNPTIPDAEYDKLFVELQALEAAHP ELRAPDSPTLRVGAAPLPQFEQVTHAVPMLSLNNGFSEDDIVHFDRRVRDGLDLDGADVD YAAEVKFDGLAINLRYEHGLFVQAATRGDGATGEDVTANIRTISGIPLRLHGKNVPALLD VRGEVMMFKADFARLNERQREAGQKEFANPRNAAAGSLRQLDSRITAQRKLRFYAYGIGA LDGAAMPASHSALLDWYETLGIPVSSERKVVQGAQGLLDYYADIGTRRPALPYEIDGVVY KVNRTEDQLELGFVSRAPRFALAHKFPAEEALTVVLGIDIQVGRTGAMTPVARLAPVSVG GVTVTNATLHNEDEVLRKDVRVGDTVIVRRAGDVIPEVLAVVLEKRPEPAPLPFKMLEAC PVCGSHVVREEGEAIARCSGGLFCSAQRKEAFRHFAGRRTMDIEGLGERYIDTLVELEYV HGLADLYSLTLDKLLEMKLRADERDGSTPETVQQGKIPTKWAENLLAGIEASKRPPLERF LFALGIRHVGESTAKTLAEWLGSLNYVRRAPAALLRVLPDIGGTVAESIADFFAEAKNQQ ALDALLAAGVTPQGEHAPSAKLRTQLEQTKLLAALGIPKLTEPRSKQLVERGVTLASLAA QGASFHAGLPAAVAEALAAWLATEENVALLGQLDALRTELLSQLPELPAAGGKLDGKTFV LTGTLPTMGRDEAAALIEAAGGKVSGSVSKKTGFVVAGADAGSKLAKAQELGVAVLDEAG LLALLAQE NT seq 2367 nt NT seq  +upstreamnt  +downstreamnt atgactgatctgaccaaccaggacgccgcggcgcggaatgccgcccagcgcgtcctggca ctcaccgccgaactcaaccggcacctgcacgcctaccacgtgctcgacaatcccaccatt cccgacgccgagtacgacaagctgtttgtcgaactgcaagcgctggaggcggcccacccc gagctgcgcgcgcccgattcgcccaccttgcgtgtgggcgcggcgcccttgccgcaattc gagcaagtcacgcacgcggtgccgatgttgtcgctcaataatggtttctccgaggacgat atcgtccacttcgaccgccgcgtgcgcgacggcctggacctcgacggcgccgacgtcgac tatgctgccgaagtgaaattcgacggcctggccatcaacctgcgctatgagcacggcctg ttcgtgcaggcggccacgcgcggcgatggcgccacgggcgaggacgtgacggcgaatatc cgcaccatttccggcatcccgctgcgcctgcatggcaagaatgtgccggcgctgctcgac gtgcgcggcgaagtgatgatgttcaaggccgattttgcccggctgaatgaacgccagcgc gaggcgggccagaaggaattcgccaacccgcgcaacgcggcggccggcagcctgcgccag ctcgattcgcgcatcacggcccagcgcaagctgcgtttctatgcgtatggcatcggcgcc ctcgacggcgccgccatgccggcctcgcattcggccttgctcgactggtacgaaaccctg ggcatccccgtctcgtcggagcgcaaggtggtgcagggcgcgcagggcttgctcgattac tacgccgatatcggcacgcggcgtcccgccctgccgtatgaaatcgacggcgtcgtctac aaggtgaaccgcacggaagaccagctggagctgggctttgtctcgcgcgcgccgcgcttt gcgctggcgcacaagttccccgccgaagaggcattgaccgtggtgctgggcatcgacatc caggtgggccgcacgggtgccatgacacccgtggcgcgcctggcgcccgtgtcggtcggc ggcgtgacggtgaccaacgccaccttgcacaatgaagatgaagtgctgcgcaaggatgtg cgcgtgggcgataccgtcatcgtgcgccgcgccggcgacgtcattcccgaagtattggcc gtggtgctggaaaagcgtccggaaccggcgccgctgccgttcaagatgctggaagcatgc cccgtgtgcggttcgcacgtggtgcgcgaagagggcgaggccatcgcccgctgctcgggc ggcctgttctgctcggcccagcgcaaggaagcgttccgccacttcgcgggccggcgcacg atggatatcgagggactgggggaacgttatatcgataccctggtcgaactcgaatacgtg catggcctggctgacctgtacagcctgaccctggacaaattgctcgaaatgaagctgcgt gccgatgagcgcgatggttccacgccggaaacggtgcaacaaggcaagattcccaccaaa tgggcggaaaacttgctggcgggcatagaggcgagcaagcggccgccgctcgaacgcttc ctgtttgcgctgggcatccgccatgtgggcgaatcgacggcgaagaccctggccgagtgg ctcggcagcctgaactatgtgcggcgggcgccggcggccctgttgcgcgtgctacccgat atcggcggcaccgtggctgaatcgatcgccgatttctttgccgaagcgaaaaaccagcag gcgctcgatgccttgctggccgccggcgtcacgccgcagggagaacacgcgcccagcgcc aagctgcgcacgcaactcgagcaaacgaagttgctggccgcgctaggcattccgaaactg acggagccgcgcagcaagcagctggtggagcggggcgtgacgctggccagcctggccgcg cagggcgccagcttccacgcgggcttgcctgccgccgtggccgaagcgctggccgcctgg ctggcgacggaagagaatgtcgcactgcttggtcaactggacgccttgcgtactgaattg ctgtcacaattgcccgagctgccagccgccggtggcaagctcgacggcaagaccttcgtc ctgacgggcaccttgcccaccatgggccgcgacgaggcggccgccttgatcgaggcggcc ggcggcaaggtcagcggttccgtgtcgaagaaaaccggctttgtcgtggccggtgcggat gccggcagcaagctggccaaggcccaggaactgggcgtggccgtgctcgacgaagccggc ctgctggccttgctggcacaggaatag

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