Jatropha curcas (Barbados nut): 105636300
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Entry
105636300 CDS
T03922
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105636300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105636300
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105636300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_15
Arf
AAA
AAA_23
AAA_30
Zeta_toxin
nSTAND3
Arteri_nsp7a
ATP-synt_ab
AAA_7
TsaE
Motif
Other DBs
NCBI-GeneID:
105636300
NCBI-ProteinID:
XP_012074943
UniProt:
A0A067KKW4
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MAVVELQGPTIEISGLKFTYPGIDGYPPPGSKPLIDDFSLTLKSGDRCLLVGSNGAGKTT
ILKILGGKHMVEPQMVRVLGGSAFHDTALTTSGDLCYLGGEWRREVAFAGFDIPIQMDVS
AEKMIFGVAGSDPQRRAELIRVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEI
TVDLDVLARADLLKFLTKECEERGATIIYATHIFDGLEEWPTHIAYVAHGKLQLAMPMAK
VKEISNLSLMRTVESWLRKERDEERKRRKERKASGLPEYEKQIDGSRVTGDPAQAAVRAM
NNGWAAGRLHSTIAGEENFFLSSNRVLRQ
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgtggagcttcaaggaccaacaatagagatcagcggtctcaagttcacgtat
ccaggaatcgacggatatccaccgcctggatccaaacctttgatcgatgatttctctctc
acactcaagtctggtgatcgctgccttctcgttggatccaatggcgccgggaaaacaacg
atattgaagatattgggagggaagcatatggtagaaccgcagatggttcgtgttttggga
gggtctgcttttcacgacactgctttgacgacgtctggtgatctctgttatcttggagga
gagtggaggcgagaagttgcttttgctggctttgatattcccatacaaatggatgtttct
gcagagaaaatgatatttggtgtggcaggtagcgatcctcaaagaagagcagaactaatc
agggtattagatattgatctctcatggaggatgcacaaggtttctgatggtcaaagaaga
agagtgcaaatttgcatgggtctcctaaagccattcaaggttcttcttcttgatgagata
acagttgaccttgatgtgctggcaagggctgaccttctgaagttcttgacaaaagaatgt
gaagaaagaggtgctacaattatttacgcaacccatatatttgatggattagaggagtgg
ccaacccatattgcgtatgtggctcatgggaagttacaattagcaatgccaatggcaaaa
gtgaaggagatcagcaatttgtcacttatgagaacagtggagagctggctgaggaaagaa
agagatgaggagaggaagagaagaaaagaaagaaaggcaagtggtcttccagaatatgaa
aaacaaatagacggaagtcgagttactggtgatccagctcaggctgctgttcgtgctatg
aacaatggttgggctgcaggaagactgcattcaaccattgcaggtgaagagaattttttc
ctaagctcaaatagagttttgagacaatag
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