Jatropha curcas (Barbados nut): 105647368
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Entry
105647368 CDS
T03922
Name
(RefSeq) transcription factor PIF3 isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu04075
Plant hormone signal transduction
jcu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105647368
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105647368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jcu03000
]
105647368
Transcription factors [BR:
jcu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
105647368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
105647368
NCBI-ProteinID:
XP_012088810
UniProt:
A0A067JHJ2
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All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MPLSELVYRLAKGKFDSSQEKNPTYLTDLSSAPENDFLELVWENGQVQSSKGRKNQISNG
LLSQTSKIRDKDIGNGSNNKMGRFGSMGSVLGEVPMSMPSVELGSNQDDDMVPWLNYPID
DPLQHDYCSEFLTELSGVTVNENCQNHYPSLDKRNSGNQSIRDSPTVSVHNVSSIEQAHM
PKVSSTEHADAASAGPRTSSSHLYPSPSQQCQTSFPYFRSRFSVNNGENINNLTRHPASG
NSIRGPSSRGGFPSTEAQKSSPVLSSTNSSLMNFSHFSRPASLVKANLHNIGTRAGSGIS
NIETMGGKDKGSDTSNSNPVEPTCVDTFGGLPKDLSSQSQPIMVSSKVDAKPLNHKPTEE
LLPAKQPEALDQEDDSKNDRSHCQIAESAIRGLADSGKNAEPVVASSSVCSGNSVERVSE
EPTQDLKRKYQEIEESEGPSEDVEEESVGAKRAAPARGSTGSKRSRAAEVHNLSERRRRD
RINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPSMMLPPGMP
HMHAPHMAQFSPMGVGMGMGMGFGMGMPDMIVGSSGCSMIQMPPMHGAHFPSPPISGPSA
LHGMSGSNLPIFGLSSQGHPMPYPCAPLMPMSGGSLLKTTMGMNAGGVAGPMNNLDSAPV
SGSKDSIQNVNSRTMQNCGANISMNQTSRQCQVTNDRIEQPALVQNSGPSSEVTDGGRAL
KSANANDNVPGRAAAGCD
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgtctgaactagtatatcgattggctaaaggaaagtttgattcttctcaggag
aagaatcccacttacttaactgatctttcttctgcacctgagaatgattttcttgagcta
gtatgggaaaatggtcaagttcagtccagtaaaggtagaaagaaccaaatttctaacggc
ttactatctcaaacctcaaagattagagataaagatataggtaatggcagcaacaataaa
atgggacgatttgggtccatgggttctgtactaggtgaagttccgatgtctatgccgtct
gttgaattgggttcgaatcaagatgatgacatggtaccatggttgaattatccgattgat
gatcctctgcaacacgattattgttctgagtttttgactgaattatctggagttactgta
aatgaaaactgtcagaatcattacccatcgttggataagagaaatagtggtaaccaatcg
ataagggactctcctactgtttctgtacataatgtttcaagtatagagcaagctcacatg
ccaaaagtttcttcaacagagcatgctgatgctgctagtgctgggcctagaactagttct
agtcacttgtatccatcaccgtcgcagcaatgccaaacatcgttcccatattttagatcc
agattttcagttaataatggtgagaatataaacaatctaactcgtcatccagcttctggg
aattcaatacgaggtccatcttcaagaggtggttttcctagcacagaagcgcagaagtca
agtccagtgttgtcttctactaactccagtttaatgaatttctcacatttctcaagacct
gcttctcttgttaaagctaaccttcataatattggcacaagggctggttcaggaatttca
aacatagaaacaatgggaggtaaggataagggctctgatacaagcaatagcaatcctgtt
gagcccacatgcgttgatacatttggtggtttaccaaaggatttgagctcccagtcccag
cctatcatggtgtcatccaaggttgatgctaaaccgttgaaccataagcctactgaggaa
ctccttcctgcaaagcagcctgaggctttggaccaagaagatgactctaaaaatgataga
agtcattgtcaaatcgctgaaagtgcaattagaggattggcagatagtggaaaaaatgca
gagcccgtagttgcttcttcttctgtttgctcaggcaatagtgtggagagagtttcagaa
gaaccaacacaggatttgaagagaaaataccaggaaatagaggagtctgaaggccctagt
gaagatgttgaagaggaatcagtaggtgcaaaaagagcagctcctgctcgagggagtact
ggctccaagagaagccgagcagcagaagtacataatttgtctgaaaggaggcgaagagat
aggatcaacgagaagatgcgagccctacaggaactcataccaaactgcaacaaggtggac
aaagcttcaatgctcgatgaggctattgagtatttaaagacacttcagcttcaggtacag
attatgtcaatgggagctggtttatatatgccatcaatgatgttacccccagggatgcct
cacatgcatgctccccatatggctcaattctcacctatgggagttggaatggggatggga
atgggttttgggatgggtatgcctgatatgatcgttggatcttctggctgctctatgatt
cagatgcctcctatgcatggagcacattttcctagtccgccaatatcgggtcctagtgct
ttgcatgggatgagtggatctaatcttccaatatttggactttctagtcaaggacatcca
atgccatatccttgtgcacccttaatgccaatgtcaggaggatctcttctaaaaactacc
atgggaatgaatgctggtggggtggcaggtcccatgaataatttggattcagccccagtc
tctggttcaaaggattcaattcaaaatgtcaactcacgaacaatgcaaaactgtggtgcc
aatatctcaatgaatcagacgtctagacagtgccaagtgacaaatgatcgtattgaacag
cctgctttggtgcaaaacagtggtccatcctctgaagttactgatggtggaagagctctg
aagtcagcaaatgcgaatgacaatgtgcctggcagagctgctgctggttgtgactga
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