KEGG   Jatropha curcas (Barbados nut): 105647651
Entry
105647651         CDS       T03922                                 
Name
(RefSeq) 5'-3' exoribonuclease 4
  KO
K20553  5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    105647651
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jcu03019]
    105647651
Messenger RNA biogenesis [BR:jcu03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     105647651
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC zf-CCHC_5
Other DBs
NCBI-GeneID: 105647651
NCBI-ProteinID: XP_012089209
UniProt: A0A067JVR9
LinkDB
Position
Unknown
AA seq 965 aa
MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSIPIDVSRPNPNGVEFDNLYLDMNGII
HPCFHPEGKPAPPTYDVVFKSIFDYIDHIFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRF
RAAKDAAEAEAEEERLRKEFEAEGKLLSAKEKPETSDSNVITPGTQFMAVLSAALQYYIQ
MRLNHNPGWRYTKVILSDANVPGEGEHKIMTYIRLQRNIPGFNPNTRHCLYGLDADLIML
SLATHEIHFSILREMVTFPGQQEKCFSCGQTGHLAAECHAKQGDNALDWNVVDDSPIHKK
KYQFLNIWVLREYLQYELAIPSPPFEINFERIVDDFVFMCFFVGNDFLPHMPTLEIREGA
INLLMHVYRKEFSAMGGYLTDAGEVNLDKVEHFIQSVAIYEEQIFQKRTRIQQALENYEE
MKIKARKESSEEIPAPVADKVKLGEPGYKERYYAEKFELSKPDEIDRVREDVILNYVEGL
CWVCHYYYQGVRSWRWFYPYHYAPFASDLKGLTDLEITFFPGEPFKPFDQLMGTLPAASS
NALPEEYRKLMTDPSSPIYKFFPSDFEIDMNGKRFSWQGVAKLPFIDERKLLSQTKKLES
SLTEEERVRNSKMHDLLYVHLAHPLAAKITAYYQANILLRPFERFCWEIDTNASSGMNGY
LWLDERNVWRSVVPSPVNGLPDIVHNQVLNITYLAPKDHIHIPELPSGVVMPEKILKPLD
VKPFPTLWHEDNSGRRYQGRDRPQVPGAIAGPLLGEAAHRLVKTTLNIRSGGSSSRFSEQ
VPYRNIPGNHTFNRTRPAGHYSGQEKGYIDDPNFYYGHHNNQQGLISNTRFPPLSNGVTG
NRNNFRNQERAQYPEQYRDLRTGISALTVEENNRRPPVVVMQRMPTSGYGSNLPNQFEQN
LGPLPSPPTNWIGKGAGDADMYFRQEAVQRSANEKQVKQVYQIKTRAAQETSHLVTREAS
DLNQQ
NT seq 2898 nt   +upstreamnt  +downstreamnt
atgggcgtgccggcgttttacaggtggctcgcagaccggtatccactagccattgtcgat
gtagttgaagaagaacctaaagaagatgccaatggcgtctctatccctattgatgtctca
agacctaaccctaacggcgttgagttcgataacttgtatttggatatgaatggtataatt
catccttgtttccatccagaagggaagcctgcgcctccaacttatgatgttgtcttcaaa
tcaatatttgattatattgaccatattttctcattggttcgcccgaggaagcttctatac
ttagcaattgatggggttgcacctagagctaaaatgaatcagcaacggtctcgacgcttt
agagcggcaaaagatgctgctgaagcagaagctgaggaagaaagattgagaaaagaattt
gaggcggaggggaagctcttatctgctaaagaaaaacctgaaacatctgactctaatgtc
atcactcctggcactcaatttatggcagtgctatcagctgcacttcaatattatattcag
atgagattaaaccacaacccaggctggcggtatacgaaggttattctttctgatgcgaat
gttcctggtgagggagagcacaaaatcatgacatatataagattacaacgtaatattccc
ggtttcaatccaaacacacggcattgtctatatggtctggatgcagatttgattatgctg
tctttagcaacacatgaaattcatttttcaatattgagagagatggtcacgtttcctggg
caacaagagaagtgttttagctgtggtcaaactggccatcttgcagctgagtgtcatgct
aagcaaggagataatgctttggattggaatgtagtggatgatagcccaattcacaagaag
aaatatcagttccttaacatctgggtgttgcgagagtatttgcaatatgagttggcaatt
ccaagtcctccatttgagataaactttgaacggatagtggatgactttgtgtttatgtgt
ttctttgttggcaatgactttcttccccacatgccaacgttggaaatcagggagggtgct
ataaatttgttgatgcatgtatacagaaaagagttctctgcgatgggtggttatcttact
gatgcgggtgaggttaatctagataaggtagaacattttatccagtcagttgcgatttat
gaagaacaaatctttcagaaaaggactcgtatacagcaggcattggaaaattatgaggag
atgaaaatcaaagcaagaaaggagtcctctgaagagataccagcaccagttgcagataag
gttaaattaggggaacctggttacaaagaaagatattatgctgagaaatttgagttatca
aagccagatgaaattgatagagttagagaagatgttattttgaactacgtggagggtttg
tgttgggtctgccactattactaccagggtgttcgctcttggcgatggttttatccgtac
cattatgctccatttgcctctgatctcaagggccttactgacctggaaataactttcttt
ccgggagagccgtttaaaccctttgatcagctaatgggaaccctaccagctgccagttct
aatgctttgccggaagaatacaggaaattgatgactgatccatcatcaccaatatataaa
tttttcccctcagattttgagattgacatgaatggcaaacgcttttcttggcagggtgtt
gccaaattgccattcattgatgagcggaaattactttcccagaccaagaaactagaaagc
tctttaacggaagaagagagagtccgaaatagcaagatgcatgatttgctatatgtccat
cttgctcatcctctggcggcaaaaatcacagcatactatcaggctaacattttgttacgc
ccttttgaaagattttgttgggaaatagacacaaatgccagttctgggatgaatggatat
ctttggttagacgagaggaatgtctggagaagtgtggtcccttcccctgtcaatgggctg
ccagacatagtgcataaccaagttttaaacatcacatatcttgctcctaaagatcatata
cacatccctgaacttcccagtggcgtggtcatgcctgaaaagatcttgaaacctttagat
gttaagccattccccacattatggcatgaagataatagtggtcggcgctaccaaggtcga
gacaggccgcaagtacctggagcaatagcaggtcctttattgggagaggcagctcaccgt
cttgtaaagaccacgcttaatatcagatcaggtggttcatcttctagattttctgagcaa
gtgccatatcgtaatatccctggaaatcatacgttcaacagaactaggccagctggacat
tattctggtcaagaaaagggctacattgatgacccgaacttttattatgggcatcacaat
aaccagcaaggcctaataagtaatactagatttcctccattgtcaaatggtgtgacaggg
aatcggaacaactttaggaatcaggagagagcacaataccctgaacagtaccgagacttg
aggactggaatatctgcattgactgtagaagaaaataatagaaggccacctgtagttgtg
atgcagcgcatgccaacatcaggatatggatcaaatttgcccaaccagttcgagcagaac
ttgggtccacttccatcaccacccactaattggattggtaagggagcaggagacgctgat
atgtactttcgacaagaagcagtgcaaaggagtgctaatgagaagcaagtgaagcaggtt
tatcagattaagacacgggcagcacaagaaacatcacatctagtcactcgagaagcatct
gatctaaaccagcaataa

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