Jatropha curcas (Barbados nut): 105648082
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Entry
105648082 CDS
T03922
Name
(RefSeq) protein SIEL
KO
K13141
integrator complex subunit 4
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jcu03041
]
105648082
Spliceosome [BR:
jcu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
105648082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
Cnd1
HEAT_2
PDS5
RTP1_C1
INTS4_8HBD
Adaptin_N
MMS19_N
Motif
Other DBs
NCBI-GeneID:
105648082
NCBI-ProteinID:
XP_020540539
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MEQQVWSLCGKSVDRDKPLSLQALASMRSLIVNPHTSNSTISSILETLTHSLKLTGDPLT
YHHTLKLLTDLASHRSHLSPLMFHSVFNSLLSANSVLLATESLVALSSISESNQNLPIEL
DDRFFVSLCFGASISARMWLLRNAKRFGVRPYVLFTVFLGFTKDPYPYVRKEALDGLVGL
CKYDVFEDQTVIKGCYCRGVELLKDAEDSVRSAAVRVVSEWGQMLIAANREEDKIKWSNT
VFLQLGSMVRDMNVGVRIEAFIAIGRIQMVSEDILLQTLSKKVLPVMKEKKSHSLCTADS
LEILAATAAGAFVHGLEDEFFEVRKSACYSLRNLIILSAEFSGRALNLLMDMLNDNSMVV
RLEALETVHHMATSGCLTVQEMHMHMFLGTLVDSDDLIRSAARKIFRLVKLSSLELFRLS
VEGILESLQKYPQEEADIFSVLFYMGRSHGNFTACFIKEVSQEIEPDSNGHLGLDSARVA
AFLVLAISAPHSCDQNGQSIPPRFFSYAVTLLGRISSALRDVVDQNTLLEYLSQCSRSSI
SSGMEIEEEESLLPLVNADVTSHTCMDGSNPVAMPVCSGNSEFQPVLSCENGDAVTLLGE
FQQEENDQVRNSVNLILAKVKDIWLLVQSRSISEALNTMRACKKELAMFTPVLPEPSASL
AFTLQYLKVIKLLAKITGHIMRKVQSYEIGEIEILFGKLERRLRELRCRFIGLSKEEESL
IFELIVVACILRLCKLEVCCYLDTLKKLSTTISLLESLHEEGSIELSNFVMEVSKTLPEI
GTLNGGVSFCPLRFANLINHYSVKQFNLYGVRHLSGALDVPDNDSENPLPFVLGLPVAIP
LEITLHNVSSDARLWLRMAMNEELVQFVFLDLNILGGCDEVKKLTFTAPFYRTPRAGSFT
LRICVGMECLFEDVHSVKSLGGPKHALVYICPEKEVYLCSV
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaagtttggagcttgtgcgggaagtctgtcgacagagataagcctctttct
ctgcaagctctagcttccatgaggtctcttattgttaatcctcacacttccaattccaca
atctcttcaattcttgaaaccctaactcactctctcaaactcactggtgatccactcact
taccaccacactctcaagctactcaccgacctcgcatcacaccgttctcacctttcacct
cttatgttccattcggtcttcaactctctcctttccgccaactcagttctccttgctact
gaatcactcgtcgcactctcttcgatctcagagagcaatcaaaatttaccaatcgagctt
gatgatagattctttgtttcgctgtgctttggtgcctcaatttctgcacggatgtggctt
ctaagaaatgcgaagaggtttggtgtaaggccatacgtcttattcactgtgtttttggga
tttacaaaggacccttatccctatgtgaggaaagaagctttggatggattagttggtttg
tgcaaatacgacgtttttgaggatcagactgttattaaaggatgctattgccgtggtgtt
gaacttctaaaagatgcagaagattctgtacggtctgctgcagttcgtgtggtcagtgaa
tggggtcaaatgcttattgcagctaatcgagaggaagataaaataaaatggtcaaataca
gtattcctacagcttggttctatggtaagagatatgaatgttggagtcagaattgaagca
tttattgccattggaaggatacaaatggtatctgaggacattttattacaaaccttatct
aagaaggtcctaccagtaatgaaagaaaagaaatctcacagtctatgcactgcagacagt
ttagaaattttagcagcaactgctgctggagcgtttgttcatgggctcgaggatgaattc
tttgaggtgagaaaatctgcctgttactcattgcggaatctcatcatactttctgctgag
ttttctggtcgggccttaaacctgttgatggacatgctgaatgataattcaatggttgtc
aggttagaagctttggaaacagtgcatcatatggcaacctctggttgtctaactgtgcaa
gagatgcacatgcatatgtttcttggcaccttagttgacagtgacgatttaataaggtct
gctgcgagaaaaatttttagattggtgaagctgtcgtctttggagttatttagactatct
gttgagggcattcttgagagtttgcagaaataccctcaggaagaagctgatatcttctct
gttttgttttatatgggtcgaagccatgggaactttacggcctgctttattaaggaggtt
tctcaagagatagagccagattctaatggacatttgggcctagatagtgcaagagtggct
gcatttcttgtacttgccatctcggctccacactcatgtgatcagaatggccaaagtatt
ccacctagatttttctcgtatgcagttacattgctagggcggatttcttctgctctgaga
gatgttgtggaccagaatacgcttttggaatatttatctcaatgcagtagatcctccatt
tcttctggcatggaaattgaagaggaggaatcactgctgcctttagttaatgctgatgtt
acatcacatacttgcatggatggtagtaatcctgttgcaatgcccgtatgtagtggaaat
tctgaatttcagcctgtgttatcctgtgaaaatggggatgcagtgactttacttggagaa
ttccagcaggaagagaatgatcaagtcaggaattctgtgaatcttatccttgccaaggtc
aaagatatatggctgttggtacaatcaagatccatcagtgaagccctaaataccatgagg
gcttgtaagaaagagttggcaatgtttactcctgtgttgcctgaaccttctgcttcattg
gcatttactttgcaatacctcaaggtaattaaactgcttgctaagataacagggcacatt
atgcggaaggtccagtcttatgaaattggagaaatagagattctctttggtaaattagaa
aggaggcttagggaattgaggtgtaggtttatagggctttctaaagaagaagagtcgctt
atctttgagcttatagttgtggcatgcatactgaggttgtgcaaacttgaagtttgttgc
taccttgatactttgaaaaagctgtctactacaatttcacttttagaatctcttcacgag
gaaggatctatcgaattgtccaattttgtgatggaagttagtaaaactttgccagagata
ggcactttaaatggaggagtttccttttgtccccttaggtttgcgaatttgattaatcac
tattctgttaagcagttcaatttatatggagtaaggcatttatccggagcattggatgtt
cctgataatgattctgaaaaccctcttccttttgtcttgggcttacctgtagccatacct
ttagagattactttacacaatgtttcaagtgatgctaggttgtggcttcggatggcaatg
aatgaagagctggttcagtttgtctttttagatttgaacattcttggaggctgtgatgag
gtgaagaaacttacatttactgcacctttttacagaactccaagagcaggttccttcaca
ttaagaatttgtgttggaatggaatgcttgtttgaggatgttcattcagtcaaaagcctt
ggaggtccgaaacatgcattagtatatatttgccctgaaaaagaagtttatctgtgctca
gtttag
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