Jatrophihabitans cynanchi: M6B22_20055
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Entry
M6B22_20055 CDS
T09893
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
jcy
Jatrophihabitans cynanchi
Pathway
jcy00300
Lysine biosynthesis
jcy00550
Peptidoglycan biosynthesis
jcy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jcy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M6B22_20055
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M6B22_20055
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
jcy01011
]
M6B22_20055
Enzymes [BR:
jcy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
M6B22_20055
Peptidoglycan biosynthesis and degradation proteins [BR:
jcy01011
]
Precursor biosynthesis
Amino acid ligase
M6B22_20055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
WAX56796
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All DBs
Position
4111704..4113236
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AA seq
510 aa
AA seq
DB search
MPDALIDAAGEIPRPAQVEPVRLRALRLGTGRVDGAGSADVAVSGVTATSAAVRPGDLFA
ALPGRTAHGAAYVPQALASGAVAVLTDPAGRSAVPDAVPTVVVEDVRAVLGALAAQVYGD
PSRRLRVQAVTGTSGKTTTTYFLRAGLRAAGRTTGLIGTVATLIGDREVKTGFTTPEAPE
VHALLAVMAEAGVGDVAMEVSSHALAMGRVDGVRFETAAFTNLSQDHLDFHADMADYFAA
KARLFDGRARNAVVVTDDEWGVRMAAIAGPEVVTVNTGGDAATWRASEVRASADGHTRFR
VLGPHADVETACAVPGRYNVANALLAIAMLEQVGVPVEVAAPAVAVATVPGRMERIDAGQ
PFLAIVDYSHKPAAVDGALRALRPLTRGRLIIVLGCGGDRDRGKRPHMGAIAARAADLLV
ITDDNPRSEDPAAIRGAMRDGALAVPAAERGEVIEIGDRAAAIAHAVDLARVGDTVLVAG
KGHEAGQEIAGTVHPFDDRSVLRHALEAAR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
gtgccggacgctctcatcgacgctgccggggagatcccccgcccagcccaggtcgaaccg
gtgcgcctgcgggcactgcggctcggtacgggccgggtagacggcgcgggcagcgcggat
gtcgcggtgtcgggggtcaccgcgacgagcgccgcggtgcggccgggtgacctgttcgca
gcgctgcccgggcgcaccgcgcacggcgccgcctacgtgccgcaggcgctggcgtccggt
gcggtggcggtgctcaccgatccggcgggccggtccgccgtgcccgacgcggtccccact
gtcgtcgtcgaggacgtgcgtgccgtgctcggcgcgctggccgcccaggtgtacggcgac
ccgagccgtcgcctgcgcgtacaggccgtgaccggaacgagcggcaagaccaccacgacg
tacttcctgcgtgccggcctgcgcgccgccggccgcacgaccgggctgatcgggacggtc
gcgaccctgatcggcgaccgcgaggtgaagaccggcttcaccacacccgaggcgccggag
gtccatgcgctgctcgcggtcatggccgaggcgggggtgggcgatgtcgcgatggaggtg
tccagccacgcgctcgcgatgggccgcgtcgacggggtgcggttcgagaccgccgcgttc
acgaacctgtcgcaggaccacctggacttccacgcggacatggcggactacttcgcggcc
aaggccaggctgttcgacggccgggcgcgcaacgcggtcgtcgtgaccgacgacgaatgg
ggcgtgcggatggccgcgatcgccgggccggaggtggtgacggtgaacaccggcggcgac
gcggcgacgtggcgggcgagcgaggtgcgggcgagcgcggacggccacacccgattccgg
gtgctcggcccgcacgcggacgtcgagaccgcctgcgcggtgcccggccggtacaacgtc
gcgaacgcgctgctcgcgatcgcgatgctcgagcaggtgggcgtgccggtcgaggtggcc
gcgccggcggtcgcggtcgcgacagtgcccgggcgcatggaacgcatcgacgccgggcag
ccgttcctcgcgatcgtcgactacagccacaagccggctgccgtggacggggcgttgcgg
gcactgcgcccgctcacccgggggcggctgatcatcgtgctcggctgcggcggcgaccgc
gaccgtggcaagcggccgcacatgggcgcgatcgcagcgcgcgccgctgacctgctggtg
atcaccgacgacaacccgcgctccgaggaccccgccgcaatccgcggcgcgatgcgcgac
ggcgcgctcgcggtcccggccgcagagcgcggcgaagtgatcgagatcggtgaccgcgcc
gcggccatcgcacacgccgtcgaccttgcccgcgtaggtgacacggttctcgtcgcgggc
aagggccacgaggcggggcaggagatcgccggcacggtgcacccgttcgacgacaggagc
gtgttgcggcacgcgctggaggccgcccggtga
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