Jeongeupia sp. USM3: BJP62_01790 Help Entry BJP62_01790       CDS       T04552                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism jeu  Jeongeupia sp. USM3 Pathway jeu03030   DNA replication jeu03410   Base excision repair jeu03420   Nucleotide excision repair jeu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:jeu00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     BJP62_01790    03410 Base excision repair     BJP62_01790    03420 Nucleotide excision repair     BJP62_01790    03430 Mismatch repair     BJP62_01790  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:jeu03032]     BJP62_01790    03400 DNA repair and recombination proteins [BR:jeu03400]     BJP62_01790 Enzymes [BR:jeu01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      BJP62_01790 DNA replication proteins [BR:jeu03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      BJP62_01790 DNA repair and recombination proteins [BR:jeu03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      BJP62_01790    NER (nucleotide excision repair)     GGR (global genome repair) factors      BJP62_01790    MMR (mismatch excision repair)     DNA ligase      BJP62_01790   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       BJP62_01790 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT Nlig-Ia BRCT_2 DUF7340 DUF4796_N Bep_C_terminal Motif Other DBs NCBI-ProteinID:  AOX99293 UniProt:  A0A1D9BA49 LinkDB All DBs Position 391982..394372 Genome browser AA seq 796 aa AA seqDB search MTISDSVLARAAELRALLHRYGHEYYVLDAPTVPDAEYDRLFRELEAIELAHPELKAADS PTQRVGGQPLPQFEPVRHAVPMLSIRTETDVSAAGALAFDASVRKELALGDGDAPVDYVA ELKFDGLAISLRYEAGVLVRAATRGDGMTGEDVTQNIRTIGQIPLRLHGDAPPLLEVRGE VYMRRDDFDAMNEKQEAAGAKTFVNPRNAAAGAVRQLDPAIAAMRPLSFFAYGVGEVDGW QPAAHSDLLDALQGFGLPVCAERVRTRGGAGLVAFHDRVAALRADLPFDIDGVVYKVDSL ALQQELGFRSREPRWAVAHKFPAQEALTTVEAIDVQVGRTGAITPVARLVPVFVGGVTVT NATLHNEDEVRRKDVRVGDTVIVRRAGDVIPEVVGVVQAERPMVERPGADMFDTVREPKY APFELPKACPVCGSHVVREEGEAIARCSGGLFCSAQRKEAIRHFAGRRMMDIDGLGERYI DNLVDLDYVHGVADLYRLTLADMLEMKRRADERDSVVPETVKAGQIASKWAENLIAGIAA SKRPPLARLLFALGIRHVGESTAKTLADWFGDLALIRKAPAPLLRVLPDVGATVADSIAD FFAEPKNQQALDALLGAGVAAADTHPPSAEWRDRLAVAELYAVLGVPKLTPLRARQLAEV APTPAVLAAAGVASLGGLPADVLASLQAWLAVDGRRAMLNELDAQREVLLASLPAQAEAA GVLAGKTLVLTGTLQTLSRDQAQALIEAAGGKVSGSVSKKTDYVVAGDAAGSKLAKAASL GVAVLDEAGLRALLAG NT seq 2391 nt NT seq  +upstreamnt  +downstreamnt atgacgatttccgattccgtgctcgcccgtgcggccgaactccgtgcactgttgcaccgc tatggccacgagtactacgtgcttgatgcaccaacggtgcccgatgccgagtacgaccgg ttgttccgcgagctcgaggcgatcgagctggcgcatccggagctgaaagccgccgattcg ccgacgcagcgtgtcggcggacaacccttgccgcagttcgagccggtgcgccatgcagtg ccgatgctgtcgatccggaccgagaccgacgtgagtgcggccggtgcgctggctttcgat gccagcgtacgcaaggagctggcgctcggtgatggtgatgcgccggtcgattacgttgcc gaactgaagttcgacggtctggcgatcagtttgcgatacgaagcgggcgtgctcgtccgg gcggcgacacgcggcgacggcatgaccggcgaggacgtcacgcagaacatccgcacgatc ggccagattccgctgcggctgcacggcgatgcaccaccgctgctcgaagtgcgcggtgag gtctacatgcgtcgcgacgatttcgatgcgatgaacgaaaaacaggaagccgcgggcgcc aagaccttcgtcaacccgcgcaacgcagccgccggcgcggtgcgccagctcgatccggcg attgccgcgatgcggccgctgtcgttcttcgcctacggtgttggcgaggtcgacggctgg cagccggcggcgcattcggatctgctcgatgcgctgcagggctttggtctgccggtgtgt gccgagcgcgtccggacgcggggcggggccgggctggtggcgtttcacgaccgcgttgcc gcgctgcgcgccgacttgccgttcgatatcgacggcgtcgtttacaaggtcgattcgctt gcgctccagcaggagctcggcttccgttcgcgcgaaccgcgctgggcggtcgcgcacaag tttccggcgcaggaggcgctgacgacggtcgaggctatcgacgtccaggttggccggacc ggtgcgatcacgccggtagcgcggctggtgccggtcttcgtcggcggcgtgaccgtgacc aatgcgacgctgcacaacgaggacgaggtgcgccgcaaggacgtgcgcgtcggcgacacg gtcatcgtccgccgtgccggcgacgtgattcccgaagtggttggtgtggtgcaggccgaa cggccgatggtcgagcgccccggagccgatatgttcgatacggtgcgagagccgaagtat gcgccgttcgagctgccgaaagcctgcccggtctgcggctcgcacgtggtccgcgaggag ggcgaggcaatcgcgcgctgctcgggcgggctgttctgctcggcgcagcgcaaggaggcg atccgtcacttcgccggtcggcggatgatggatatcgacggtctgggcgagcgctatatc gacaatctggtcgatctcgattacgtgcacggcgttgccgatttgtaccggctgacgctg gctgacatgctcgagatgaagcgtcgcgccgacgaacgtgacagcgtagtgccggaaacg gtcaaggccggccagattgcgagcaagtgggccgagaacctcatcgccggtatcgctgcg agcaagcgcccgccgcttgcgcggctgctgttcgcgctcggcatccgtcatgtcggcgag tcgaccgccaagacgctggccgactggtttggcgatctcgcgctgatccgcaaagcgccg gcgccgctgttgcgcgtgctgcccgatgtcggtgcgaccgttgccgattcgattgccgat ttctttgccgaaccgaaaaaccagcaggcgctcgacgctttgctcggtgccggtgttgcc gcggccgatacccatccgccgagtgcggaatggcgcgacaggctggctgtggccgagctc tatgccgtgctgggcgtgccgaagctgacgccgctgcgcgcgcgccagctggccgaagtg gcgccgacgcccgcggtgctggctgcggccggtgtggcaagcttgggtgggctgcctgcg gatgtgcttgcctcgttgcaggcctggctggcggtcgacggccgccgtgccatgctgaac gagctcgacgcgcagcgcgaggtgttgttggcgagtctgccggcgcaggcggaagcggcc ggcgtgctcgccggcaagacgctggtgctgaccggaacgttgcagaccttgagtcgcgat caggcgcaggcgctgatcgaggctgccggtggcaaggtgtcgggcagtgtgtcgaagaag accgattacgtcgtcgccggcgacgcggcgggatcgaaacttgccaaggcggcgtcgctt ggcgttgccgtgctggatgaggcggggttgcgtgcgttgctggctggctaa

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