Jiella pelagia: OH818_22605
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Entry
OH818_22605 CDS
T08667
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
jie
Jiella pelagia
Pathway
jie03030
DNA replication
jie03410
Base excision repair
jie03420
Nucleotide excision repair
jie03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OH818_22605 (ligA)
03410 Base excision repair
OH818_22605 (ligA)
03420 Nucleotide excision repair
OH818_22605 (ligA)
03430 Mismatch repair
OH818_22605 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jie03032
]
OH818_22605 (ligA)
03400 DNA repair and recombination proteins [BR:
jie03400
]
OH818_22605 (ligA)
Enzymes [BR:
jie01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
OH818_22605 (ligA)
DNA replication proteins [BR:
jie03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OH818_22605 (ligA)
DNA repair and recombination proteins [BR:
jie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
OH818_22605 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OH818_22605 (ligA)
MMR (mismatch excision repair)
DNA ligase
OH818_22605 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OH818_22605 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
WAP68144
UniProt:
A0ABY7BWC3
LinkDB
All DBs
Position
4481540..4483840
Genome browser
AA seq
766 aa
AA seq
DB search
MAERPVEELNEAEATEELQRLAAEIAAHDRRYHGDDAPTISDADYDALRRRNGAIERRFP
ALVREDSPSVRVGAAPSAKFAKITHAVPMLSLDNAFSDEDVEDFAKRVRRFLKLADDAPL
AITAEPKIDGLSLSLRYEDGRLVSAATRGDGTVGEDVTANALTIDDIPHRLSGLRPAVFE
VRGEVYMSHADFAALNERLAAGDEPAVAEAVEEDVDAIAATESTELAEPEGAADDDAETG
KIRQFANPRNAAAGSLRQKDASVTRSRPLKFFAYAWGEVSEVPGKTQSDVVAALGRMGFS
VNPLMQRFDTIDGLIAHYHAIEDQRADLGYDIDGVVYKLDDLDLQKRLGFVSRSPRWAIA
HKFPAEQATTVLQDIDIQVGRTGALTPVAKLKPVTVGGVVVSNATLHNEDYIAGKDSNGD
EIREGRDIRIGDTVIVQRAGDVIPQVLDVLLDKRPEGAEPYRFPDHCPVCGSKAVREMNP
RTGRPDSKRRCTAGLTCPAQGREGLKHFVSRGAFDIEGFGQTYIETLFDAGLVRQPADIF
TLTFEPLRDAIEARRRVVSEARRKLQGKAEPEKAAKKAETSKAIENLLAAIEARREVALH
RFIFALGIRHIGETSAKALARHFADVDAFLEGVDAAGREQPGEAWLRLKETPHVGESTFE
ALMFVGEEALGEEAYDPLRDKAIGLKANQRAALKESFGDAAGLRDAIRAARDAAPGPAYQ
LLKSDRDIGEVATASLIQFFSEDHNREAVRALVDAGVRTTNEPLLG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacgaccggtcgaagagttgaacgaggccgaggccacggaggaactgcagcgc
ctcgccgccgagatcgccgcgcatgaccgccgctatcatggcgacgatgcgccgaccatt
tcggatgccgactacgacgcgctgcgccggcgcaacggcgcgatcgagcggcgttttccg
gcgctggtgcgggaagattcgccctcggtgcgggtgggcgcggcgccctcggcgaaattc
gccaagatcactcacgccgttccgatgctctccctcgacaacgccttttccgacgaagac
gtcgaggacttcgccaaacgggttcgccgcttcctgaagcttgccgacgacgcgccgctg
gcgatcaccgccgagccgaagatcgacgggctgtcgctatcgctgcgctacgaggacggg
cggctcgtctcggcggcgacgcggggcgacggcacggtcggcgaggacgtgacggccaac
gcgttgacgatcgacgacattccccatcgcctcagcggcttacgcccggctgtcttcgag
gtgcgcggcgaggtctatatgagccatgccgacttcgccgccttaaacgagcggctggcg
gcgggtgacgagccggccgtcgcggaggctgtggaagaggacgtggacgcgatagccgcc
acggaaagtaccgaattggccgagccggagggggcggcggatgacgatgccgaaaccggc
aagatccgccagttcgccaatccgcgtaacgccgccgccgggtcgctgcgccagaaggat
gcgagcgtcacgcggtcacggccgttgaagttcttcgcctatgcctggggcgaagtcagc
gaggtgccgggcaagactcagagcgacgtcgtcgctgcgctcggaaggatgggcttttcc
gtcaatccgctgatgcagcgctttgacacgatcgacggcctgattgcgcattatcacgcg
atcgaggaccagcgggccgatctcggctacgacatcgacggcgtcgtctacaagctcgac
gatctcgacttgcagaagcggctcggtttcgtctcgcgctcgccgcgctgggccatcgcc
cacaagtttccggccgaacaggcgacgacggtgcttcaagacatcgacatccaggtcggc
cgcacgggcgcgctgacgccggtcgccaagctgaagccggtgacggtgggcggcgtcgtc
gtctccaacgcgacgctgcacaacgaggattacatcgccggcaaggattcgaacggcgac
gagatccgcgaggggcgcgacatccgcatcggcgacaccgtgatcgttcagcgcgccggc
gacgtgatcccgcaggtgctggacgtcctcctggacaagcgcccggagggggcggagccc
taccgctttcccgatcactgcccggtctgcggctccaaggccgtgcgcgagatgaatccg
cgcaccgggcggccggattccaagcggcgctgcacggcggggctgacctgcccggcccag
gggcgcgagggcctgaagcacttcgtctcgcgcggcgccttcgacatcgaggggtttggg
cagacctacatcgaaacgctgttcgacgccggcctggtgcgccagccggccgacatcttc
accctgaccttcgagccgctgcgcgacgccatcgaagcgcgtcgccgcgtggtttccgag
gcgcgccgcaagttgcagggcaaagccgagcctgaaaaagcggccaagaaggccgagacc
tccaaggcgatcgagaacctcctggcggcgatcgaggcgaggcgcgaggtcgcgctccac
cgcttcatcttcgccctcggcattcgccacatcggcgagacctccgccaaggcgctggcg
cggcattttgccgatgttgatgcgttcctggaaggggtcgatgccgctggcagggagcag
ccgggcgaggcgtggcttcgcctgaaggaaacgccccatgtcggcgagagcacgttcgag
gcgctcatgttcgtcggcgaggaagccctcggcgaggaggcctacgatcctctccgcgac
aaggcgatcggcctgaaggccaaccagcgtgcggcgctgaaggagagttttggcgatgcc
gccggcttgcgtgacgccattcgcgcggcgcgggatgcggcgccgggccctgcgtaccag
cttctgaagtcagatcgcgacatcggcgaagtggccaccgcctcgctgatccagttcttc
agcgaggatcacaatcgcgaagccgtgagggcgcttgtggatgccggcgtgaggaccacc
aacgagcctctcctcggctga
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