Juglans regia (English walnut): 108980148
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Entry
108980148 CDS
T05245
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108980148
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
jre01007
]
108980148
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jre03016
]
108980148
Enzymes [BR:
jre01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
108980148
Amino acid related enzymes [BR:
jre01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108980148
Transfer RNA biogenesis [BR:
jre03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108980148
Prokaryotic type
Other AARSs
108980148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
108980148
NCBI-ProteinID:
XP_018806543
UniProt:
A0A2I4DHC8
A0A833XF12
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All DBs
Position
7:complement(29851937..29877765)
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AA seq
1181 aa
AA seq
DB search
MDEVCEGKDFSFPNYEEKILELWREIKAFETQLERTKDQPEYVFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQSMNGHHVTRRFGWDCHGLPIENEIDRRLDIKKREDVLNLGIDKYNEE
CRSIVTRYVQEWEKIVWRTGRWIDFNNGYKTMDLNFMETVWWVFAQLYDKGLVYKGFKVM
PYSTGLKTPLSNFEAGQEYRDVSDPEIMVTFPIIGDPHKAAFVAWTTTPWTLPSNLALCV
NANFAYVKVRNKYSGKVYMVAESRLPALPSEKPKPSIANGSIPDTKKSNPKTKGSSSGKT
GDVVDSYEVLEKVSGASLVGMKYQPLFDYFIECSESAFRVIADNYVTDDSGTGIVHCAPA
FGEDDYRVCSENQIISKGENLIVAVDDDGCFTAKIIDFSGRYVKDADKDIIEAVKAKGRL
VKSGSFMHPYPFCPRSKTPLIYRAVPSWFIKVEELKEKLLENNKQTYWVPDFVKEKRFHN
WLENARDWAVSRSRFWGTPLPVWISEDGEEVLVMDSIEKLEKLSGVKVDDLHRHKIDHIT
IPSSRGPEFGVLRRIADVFDCWFESGSMPYAYIHYPFENVELFEKNFPGHFVAEGLDQTR
GWFYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKSLKNYPSPLEVIDNYGADALRL
YLINSPVVRAEPLRFKKEGVHGVVRDVFLPWYNAYRFLVQNAKRLEVEGFAPFIPIDQAS
LQNSSNVLDEWINSATQSLVYFVRQEMDGYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKG
RTGEEDCRTALSTLYNVLLVSCKVMAPFTPFFTEVLYQNLRKVSNGSEESIHYCQFPQEE
GKRGERIEQSVTRMMTIIDLARNIRERHNKPLKTPLREMVVVHPDADFLNDIAGKLREYV
LEELNVRSLEPCNDTLKYASLRAEPDFSVLGKRLGKSMGVVAKEVKGMSQEDILAFERAG
EVTIAGHCLKLTDIKVIRDFKCPDGFTEKEIDAAGDGDVLVILDLRADISLFEAGVAREI
VNRIQKLRKKAALEPTDIVEVYFKSLDEDKSLSERVLSSQDSYIADAIGSQLLPSTMMPS
QAVIIGEETFHGISGMSFVISLTRPALVVNLEAILALYAGNMKFAKGLQTYLLSRDHSVL
KSEFQLGNGKITVSCIENLPPVDLLLGEHLFLTVGDYTKKI
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagtttgcgaagggaaggatttctcctttccaaactacgaggagaagatcctt
gagttgtggagggagatcaaggcattcgaaacccagctggagcgcaccaaggaccagccc
gagtacgtcttctatgacgggcctcccttcgcaacggggctccctcactatggccacatc
ctcgccggtaccatcaaggacatagtcacccgctaccagtccatgaacggccaccacgtc
actcgccgcttcggctgggattgccacggccttcccatcgagaacgagatcgaccgtcgc
ctcgacattaagaagcgcgaagatgtgttgaacttggggatcgataagtacaacgaggag
tgccgtagcattgtcacgaggtatgtgcaggagtgggagaagattgtttggcggactggg
cggtggattgatttcaataatggttacaagactatggacttgaacttcatggagactgtg
tggtgggtctttgctcagctttatgacaagggtcttgtgtataaaggtttcaaggtcatg
ccatacagcactggtttgaagacgcctctatctaattttgaagccggtcaggaatatcgg
gatgtgtctgaccctgaaattatggtgacttttccaataattggtgatccgcataaggca
gcctttgtggcttggacaacaactccgtggacccttccgagtaatcttgccctttgtgtc
aatgcaaattttgcctatgttaaggttcgcaacaagtactctggaaaagtatatatggtt
gctgaatctcgtttgccagctcttcctagtgagaagccaaaaccaagtatagctaatgga
tctattcctgacaccaaaaaatcaaatccaaagaccaagggatcctcaagtggtaaaacg
ggagacgtagtggattcatatgaagttttggagaaagtttcaggggcttcactggtggga
atgaagtatcaaccattgtttgattattttatcgagtgctctgagtctgcatttagagtt
attgccgacaattatgttacagatgatagtggtactgggattgtgcattgtgcgcctgct
tttggtgaagatgattaccgtgtttgcagtgagaatcaaatcataagcaagggagagaac
ttaattgtagcagttgatgatgatggctgctttacggcaaagattatcgactttagcggg
cggtatgtcaaggatgcagataaggatattattgaagcagttaaggcaaaaggccgcctg
gttaagtctgggagctttatgcatccttatcccttctgcccaagatccaaaactcctctt
atttatcgagctgttccaagctggttcattaaagtagaagagttgaaagagaaattgcta
gaaaacaacaagcagacctactgggttcctgattttgtgaaggaaaagcgcttccacaat
tggctggaaaatgcaagagattgggctgttagtcgaagtaggttttggggtactcctctt
cctgtatggatcagtgaggatggtgaggaagtacttgtcatggactccattgagaaactt
gaaaagctttctggtgttaaggtggatgatctgcatcgtcacaagattgatcatattacg
attccctctagtcgcggccctgaatttggtgtccttcgacgcatagctgatgtgtttgat
tgttggtttgagagtgggtccatgccttatgcttatatccattatccatttgagaatgtt
gaactctttgagaaaaactttcctgggcactttgtggctgaagggctggatcaaacacgt
ggatggttttatactctcatggtgttgtctactgcattatttggaaagcctgcatttagg
aatctcatttgcaatggacttgtcctggcagaggatggaaagaagatgagtaaaagtctg
aaaaactatccttcacctttggaagtcattgataattatggagctgatgcattacgattg
tacctcataaactccccagtggtgcgtgcagagcccttgcgtttcaaaaaggaaggagtt
catggtgttgtcagggatgtttttcttccctggtacaatgcatatagattccttgttcag
aatgctaagagacttgaggttgagggatttgcaccattcatacccattgatcaagcctct
ctccaaaattcatctaatgtgcttgacgagtggatcaactctgctacacagagtcttgtt
tattttgtccgccaagagatggatggttatcgcctttacacggtggttccatatctcttg
aagtttcttgacaacttgacaaacatatatgtacggttcaaccgtaagagacttaaaggt
cgtactggagaagaggactgtaggacagcactctcaactctttacaatgtccttctggtg
tcatgtaaagtaatggcaccatttacaccattttttactgaagttctgtatcaaaatctt
cgaaaagtttccaatggatcagaggaaagcattcattattgccagtttcctcaagaagaa
gggaagaggggtgaacgaattgaacaaagtgttacaaggatgatgactattattgatctt
gcccgcaacattcgtgagcggcacaataaacctcttaaaacaccactaagggaaatggta
gtagttcatcctgatgcagactttctcaatgacatagctggaaagttaagagagtatgtg
ctagaagaactcaatgtacgttctcttgagccatgcaatgataccttgaagtatgcttct
ttacgtgcagaacctgattttagtgtgttaggcaagcggcttggaaaatctatgggagtc
gttgctaaggaagtcaaaggaatgtcacaggaagatattttagcttttgagagagctggc
gaagttactattgcaggtcattgtttgaagctgactgatattaaggttattcgggatttc
aaatgtcctgatggatttacagaaaaggagattgatgcagcaggagatggtgatgttttg
gtgattttggatttgcgtgcggatatctcattgtttgaggctggtgttgctcgtgagatt
gtgaatagaattcagaagttacggaagaaagctgccctagaaccaactgacattgtggag
gtttacttcaaatctttggatgaagataaatcactctcagaacgagttttgagttcccaa
gattcatacattgcagatgccattggctcccaattgcttccttctactatgatgccatca
caggcagtcattatcggcgaggagactttccatgggatctcaggcatgtcatttgttatc
agcttaacaagacctgcactagtggtcaatctagaagccattcttgcactatatgcagga
aatatgaagtttgctaaaggtctgcagacttacttgctatcaagagatcattcagttttg
aagtcggagtttcaacttgggaatgggaagataacggtcagttgcattgaaaacttgcct
ccggttgatttgttattgggggaacaccttttcttgacggttggcgattatacaaaaaaa
atctga
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