Juglans regia (English walnut): 108984013
Help
Entry
108984013 CDS
T05245
Name
(RefSeq) nuclear pore complex protein GP210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
jre
Juglans regia (English walnut)
Pathway
jre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108984013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108984013
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108984013
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_1st
Ig_NUP210_7th
Big_2
Ig_NUP210_5th
Ig_NUP210_2nd
Ig_NUP210_3rd
Ig_NUP210_16th
Ig_NUP210_15th
Ig_NUP210_9th
Motif
Other DBs
NCBI-GeneID:
108984013
NCBI-ProteinID:
XP_018811381
UniProt:
A0A2I4DW56
LinkDB
All DBs
Position
1:3699712..3733329
Genome browser
AA seq
1960 aa
AA seq
DB search
MCSKMLYFVVVLTLLLLLLLVLGPTTSYSASGPHIADVNILLPPKMTHPVEYRLQGSDGC
FKWSWDHHDILSVLPEYNSSSQCSTSARLISIAPYSGRKETAIYAADVHTGIVTRCKVFI
DIFSRIQIFHNSIKLDLDGLATLRIRAFDSEENVFSSLVGLQFTWHLMPEMDGLPHHLVH
VPLKDSPLSDCGGLCGDLNIQIKLEDSGVFSDTYLVKGIEIGQEIVSVHLLEPGLEHMAD
RITLTVAEAMSLDPASPVFVLIGAVVHYRLKIIRGNVPQVVTLPSPHYRWYVSNSSVAQV
DPIMGLTKALDLGLTTVVVEDTRVAGHMQVSSLNVVLPDTLRMYIAPVSSSADALEGAET
AEAIAAVARWYVVSGRQYLIQLKVFSRGPGAREIYLTESDDVKLYDNQSDYWSTFIVKDE
IAVKHGWQSSRILEATSQGLGKLMASLTYFSGHQETKEILKVVQEIMVCDQVKFSLEKIS
GITQSILLPWAPAVYQEVELRATGGCVKASSDYRWFSSDTATVLISASGVVQAKKPGKAT
VKVLSVFDALNYDEVVIEVSLPLSMVMLHSFPVETVVGSHLPAAVTMKASNGAYFYRCDA
FSSFIKWKSRSESFIIVNATGERPVLGMLENIRTHPSLNGPPCSWTYVYASGPGRSMLHA
TLSKDYNHVDNSLREPIALKASLRIAAYLPLIVCQACDGSKFGGYWFDMAQAESENLLEH
LDKLYLVPATNLDVMLLGGPEHWDEGVGFIETVEILDEGHGRIKNGVFVQQVSGNGRSVY
RVLCKTLGNFKLVFKRGNLVGDDHPLPAIAEVLLLVSCSHPSSIVLIADEPVNKINALRA
AIQADRNSGRIRVAPITVANGRTIRIAAVGISNSGEAFANSSSLCLRWELNGCDGLAYWD
DDFDSDRSKCSWERFLVLQNEPGLCIVRAIVIGFHDTVTDHYSGQLLESSENFLTDAIRL
QLVSTIIVSPGFSLLYFNPDAKLNLSIIGGSCFLETVVNDTQVVEVVPPPPSLQCLQLML
SPRGLGTALVTVHDIGLVPPIAASAVVQVADVEWIRITSQEEISLMEGSSQTINLMAGIN
DGNTFDSSQYAYMNIHVHIEDHIVKLVGIADTSSSRGEYVNSPNFEIMGTHLGITTLYVS
ASQQSGHEILSQPIKVEVYAPPRIHPPDIFLTPGASYVLSVEGGPTIGVFVEYASMDEGI
AAIQKSSGRLFANSHGNTTVLATFFGKGDTAICQAYGSVRIGVPSVMILNVQSEQLGVGC
EMPIYPVFPEGDLFSFYELCKNYQWTVEDEKVLSIHMATHLYGDAKEIPFTRHLDEKELG
FIKVLYGRSAGRTNITVAFSCDFISPGSNLGSRFYSASVSLLVVPDLPLALGAPITWILP
PNYTTTSLLPSSSESYGQRDGQRRKGTIVYSLLRYYGEKNEMQKDSISIHGPRIRTKDSN
NLACIQAKDRTTGRTEIASCVQVAEVAQIRITNKELPFHLINLAVGAEIKLPISYCDALG
NPFYEAYNAVVVNAETNDRDVVSTNNTCDEDGNICLKAIRHGRALVRVSMSSSKLKSDYI
LILVGAHIQPQNPVLFKGSYLNFSIEGLHDQVSGQWFTANESVISVNMLSGIAEAIGEGA
ALVIFNGSSLKLQTMVTVLTGDIISVDAPKEMLTNVPFPTKGYKFSVKLSNTYGNKFGSP
GNSKEVPYDCIVDPPFIGYAKPRMDLDTGSTYCLFFPYSPEHLVHSMPKSKDMRPDISVS
INASMREANHVSGSASALFIGGFSVLEMGENLMQLNLTPDSNTTIITILGNTDVEIHWHK
HDLLMIRPIFSEESGIGGRAQYEIKLLRDERFKDRVTITLPTNGQRVFIEVDYEPVQGAL
GTTLNKTIWATVVGCFALLVVTVVIFIRFLDRPNRSQSSIAVPAPPRTPGPATPDHSRPT
VLDESPRTPQPFVDYVRRTIDETPYYRRDGRRRFNLQNTL
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcgaagatgttgtacttcgtggtagtgctcactcttcttcttcttcttcttctg
gtcttgggccctacgacgtcgtactcagcctccggtccgcacatagccgatgttaatata
ctgttaccccccaaaatgactcatcccgtggagtacaggcttcaaggaagtgatggttgc
ttcaaatggtcatgggatcatcatgatattctatccgtgctacccgaatataattcaagt
agtcaatgctcgacgagtgcacggctgatatcgattgccccttatagtggtcgaaaggag
acagcaatatatgctgctgatgtgcacactgggattgtaactcgttgtaaagtatttatt
gatattttctccagaatccagatatttcataattctatcaaacttgatttagatgggctt
gctaccctccgtatccgcgcctttgatagtgaagaaaatgtgttctcatcattagtgggc
ttacaattcacgtggcaccttatgcctgaaatggatggattgcctcatcaccttgtccat
gttccgctgaaggattctcccctaagtgattgtggtggattgtgcggtgatttaaatatc
caaataaaacttgaagatagtggtgtattttcagatacatatcttgtaaaaggaattgaa
atcggccaggagattgtttctgttcatttgcttgagccaggattagagcacatggctgat
aggattactctaactgtagctgaagccatgtcgcttgatcccgcttcacccgtttttgtc
ctcattggtgctgttgttcattataggcttaaaataatccgtgggaatgttccccaagtg
gtcactttaccatctccacattatcgatggtatgtttcaaattcttcagttgctcaagtg
gaccctatcatgggattaacgaaagcactggatttagggttaacaactgtcgtggttgaa
gatacaagggttgctggccacatgcaagtttcatcacttaatgttgtcttaccagatact
ttacgtatgtacatagcaccagtttctagttctgctgatgctctagaaggagcagaaaca
gcagaagcaattgcagctgtggcacgttggtatgttgtttctggccgtcaatatctcata
caactgaaggttttctcccgaggacctggtgcacgagaaatctaccttacggagagtgat
gatgttaagttgtacgataaccagtctgattactggagcacttttattgtgaaagatgag
attgcagtcaaacatggctggcaaagttctagaatcctggaagcaacttctcagggactg
ggaaaattgatggcttctttgacatattttagtgggcatcaagaaacaaaggagattctc
aaagttgtgcaagaaatcatggtttgtgaccaagtgaagtttagtttggaaaaaataagt
ggtattacacaaagcattctccttccgtgggcgcctgctgtttatcaggaggtggaacta
agggcaacaggaggttgtgtaaaagcatctagtgactacagatggttttcttcagacaca
gctaccgtattgatatctgcttcaggggttgtccaggccaagaagcctggtaaagctact
gttaaagtgctatcagtttttgatgcattgaattatgatgaggtggttattgaagtttcc
ctgcccttatcaatggttatgcttcatagctttcctgtggagactgttgtgggatcacat
ctgccagctgctgtaacaatgaaagcatcaaatggtgcctatttttatagatgtgatgct
tttagctccttcattaagtggaaatctagaagtgagtctttcattattgtcaatgcaacg
ggggagagacctgtcttgggcatgctagaaaatatcaggacccatccatcattaaatggt
cctccatgctcttggacctacgtatatgcttctggtcctggtcgatctatgttgcatgcg
actctgtcaaaagattataatcatgttgataactctttacgtgaacctattgcattaaaa
gcatctttacgtattgcggcatacctaccacttatcgtttgtcaggcatgtgacggaagc
aaatttggtggttattggtttgatatggctcaagcagaatctgaaaatctattggaacat
ttggataagttataccttgttcctgcaacaaatttagatgtaatgcttcttggtggacct
gaacattgggatgaaggtgttggcttcattgagactgtggaaattctggatgaagggcat
ggtcgcattaaaaatggagtttttgtgcagcaggtttctggcaacggtaggagtgtatac
agagttttatgcaaaacactgggaaactttaaacttgttttcaaacgtggtaatttggtt
ggggatgaccatcctctgccagcaatagcggaagttttgttgttagtttcgtgcagccat
ccttcctcaattgtactaatagctgatgaacctgtcaacaaaatcaatgccttacgggct
gcaattcaagctgatcgcaattcagggagaattcgagttgcccctattactgtggcaaat
ggacgcactattcgcatagctgcagttggcattagtaactctggagaagcctttgcaaat
tcatcttctctttgtttgaggtgggaactaaacggttgtgatgggctagcctactgggat
gatgattttgattcagataggtctaaatgcagttgggagaggtttttggtcttgcagaat
gagccaggactgtgcatagttcgtgctattgttattggtttccatgataccgtgactgat
cattattctggccaactgctagaaagctcagagaattttcttacagatgcaatacgacta
cagcttgtctctaccattattgtcagcccagggttcagcttgctatattttaatcctgat
gctaagttaaatctgtctattattggtggaagctgtttcttggaaactgttgtgaatgat
actcaagtagtagaagttgttccacccccaccaagcttacagtgcttacaactgatgttg
tctcctagaggtttgggtactgcacttgtgacagttcatgatattgggctggttcctcca
attgcagcctctgctgtggtccaagttgcagatgtagaatggattaggattacgtcacaa
gaggagataagcctcatggaaggaagctcacaaactattaatctaatggctgggattaat
gatggaaacacttttgactcttctcagtatgcttacatgaatattcatgtgcatattgag
gatcatatagttaaactcgtaggcattgctgatacctccagttctcgtggtgaatatgtg
aactcgccaaattttgaaataatgggaactcatcttgggatcacaactctttatgtcagt
gcttcacagcaatctgggcatgaaattttgagtcaacccataaaggtagaagtttatgca
ccaccaagaattcaccctcctgatattttcctgacaccaggtgcatcctatgtgctttct
gttgaaggaggtccaactatcggtgtatttgttgagtatgctagtatggatgaggggatt
gcagcaattcagaaatcttcaggacgattgtttgcaaattcacatggaaataccactgtt
cttgccacattttttggcaaaggagatactgcaatttgtcaagcatatggcagtgttaga
attggagtcccatctgtgatgattttgaatgtacaaagtgaacagcttggtgttggctgt
gagatgccaatatatcctgtttttcctgagggagatttgttttctttttatgagctctgc
aaaaactatcagtggactgtagaggatgaaaaggtgttgagtatccatatggcgactcat
ttatatggtgatgcaaaagaaattcctttcactcgtcatttggatgagaaagagcttggt
ttcatcaaggttttatatggaagatctgctggcaggacaaacatcacagtcgctttctca
tgtgattttatatctcccggttctaacttaggatcaaggttctacagtgcatcagtatca
ttattggtggtgcctgatctccctcttgctcttggagctcccataacctggattcttcct
cctaattataccaccacaagtctattgccctcatcttcagaatcatatggccaacgggat
ggtcagcgtcgaaaaggaactattgtttattctttattaagatattacggtgaaaagaat
gaaatgcagaaggattctatttccattcatgggcctaggataaggacaaaagacagcaac
aatcttgcatgcattcaagcaaaagatcgcacaacgggaagaactgagattgcctcttgt
gtccaagttgctgaggtggctcagataaggataacaaataaggagttgcctttccattta
atcaatcttgctgttggtgctgaaattaaacttccaataagctattgcgatgctttagga
aatccattttatgaagcatataatgcagttgttgttaatgctgaaactaatgatcgtgat
gttgtctccacaaacaatacatgtgatgaagatggaaatatttgtctcaaggcaatacgg
catggtagagctcttgtgcgagtatcaatgagtagttcaaaactgaagtcagactatatc
ctaattttagttggtgcccacatacaacctcaaaacccggtccttttcaaaggaagttat
cttaacttcagtatagaaggtttacatgatcaagtttctggacagtggtttactgcaaat
gagagtgttatatctgtaaacatgctgtctggaatagctgaagcaattggggaaggtgca
gcactagttattttcaacggttcaagtttgaaactacaaacaatggtcacagtgctaact
ggtgatattatttctgtggatgctccaaaagagatgctgacaaatgttccttttcccaca
aaaggatataagttctctgtgaagctcagtaatacttatggcaacaagtttggatctcct
gggaatagtaaggaagttccatatgactgtattgtggaccctcctttcattgggtatgca
aagccaaggatggatcttgacactgggagcacatattgcctctttttcccttactcacca
gagcatttggtacactctatgccaaagtcaaaggacatgagaccagatatatctgtttcc
ataaatgcttcaatgagagaagctaatcatgtttcaggatctgcttctgctctttttatc
ggagggttttcggtattggagatgggggagaatttgatgcagttgaatctgacaccggac
tcgaacacgacaatcataaccatcttggggaatacagatgttgaaatccattggcacaag
cacgatctgttaatgatcagacccatctttagcgaagaatctgggattggtgggcgtgcg
caatatgagatcaaattgctaagagacgagagattcaaagacagagtaaccatcacactg
ccaaccaatgggcagagagtgttcatagaggttgactacgaacccgtccaaggagcgtta
ggaactacactgaataaaaccatttgggcaactgtagttggctgctttgccctgttggta
gtgactgtggtcatctttatacgtttcctcgacaggcccaacagatctcaatcatctatt
gctgttcctgctcctccaagaaccccaggccccgcaacccctgaccatagccgcccaact
gtcttggacgagtctcctcgaacacctcagccattcgttgactacgtgagaagaacaata
gatgaaactccatactaccggcgagatggaaggaggaggtttaatctacagaatacatta
tag
DBGET
integrated database retrieval system
