Juglans regia (English walnut): 108995958
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Entry
108995958 CDS
T05245
Name
(RefSeq) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
jre
Juglans regia (English walnut)
Pathway
jre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108995958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108995958
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108995958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
nSTAND3
ORC-CDC6-like
AAA_28
AAA_25
AAA_15
AAA
AAA_5
NACHT
AAA_23
SMC_N
AAA_22
AAA_18
AAA_30
SRP54
Zeta_toxin
PduV-EutP
AAA_33
AAA_24
Arf
DLIC
VapE-like_dom
AAA_14
Motif
Other DBs
NCBI-GeneID:
108995958
NCBI-ProteinID:
XP_018827184
UniProt:
A0A833YDK7
A0A2I4F6A4
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All DBs
Position
1:43312548..43315450
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AA seq
300 aa
AA seq
DB search
MADKETSKPIVEEVESEDLNSIRVCGMQFAYEGEPPLFADFNLKIPPGSRCLLVGANGSG
KTTLLKILAGKHMVGGRDVVRVLNNSAFHDTKLVCSGDLAYLGGSWSKTVGSAGEIPLQG
DFSAEHMIFGVEGVDPDRRLNLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLL
DEVTVDLDVVARLDLLDFFKEECDQRGATIVYATHIFDGLETWATHLAYIQDGELRRVQK
LSEVNELKNSANLLSVVESWLRAETKREKKKPTNPPAQIQKTSPFGSSPFMSSRHMAYFR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaaacttcgaagccgatagtagaagaagtggaaagtgaggatttgaac
agtatcagagtctgcggcatgcagtttgcgtatgaaggggaaccaccgcttttcgccgac
ttcaaccttaagatcccccccggatctcgatgtcttctcgttggcgctaacggatctggg
aagaccactttgctgaagattcttgctggtaagcacatggttggaggaagagatgtggtg
cgtgtgctgaacaattcggcttttcatgacactaagttggtgtgtagtggtgacttggca
tatttgggaggatcttggagtaaaaccgttggctctgctggtgagattccacttcagggt
gatttttctgcagaacatatgatatttggagttgaaggggttgatccggataggaggctc
aatttaattgagctacttgatattgatctgcaatggcgaatgcataaggtatctgatggg
cagaggcgtcgagtccaaatatgcatgggtcttcttcaccctttcaaggtccttttgcta
gatgaggttacagtggacctggatgttgttgctagactggacttactcgacttcttcaaa
gaagaatgtgatcagagaggagccacaatagtatatgcaacccatatttttgacggtctg
gagacatgggcaacccatttagcatacattcaagatggcgagttgaggagggtacagaag
ttatcggaggtgaatgagttgaagaattcagccaatctactctctgttgtagagtcttgg
ctccgtgctgaaactaagcgtgagaagaagaaacccactaaccctcctgcccaaatccag
aagacctcaccatttggtagttctccctttatgtcatccaggcatatggcatacttccgt
taa
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