Juglans regia (English walnut): 109007770
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Entry
109007770 CDS
T05245
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
jre
Juglans regia (English walnut)
Pathway
jre04075
Plant hormone signal transduction
jre04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109007770
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
109007770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jre03000
]
109007770
Transcription factors [BR:
jre03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109007770
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
109007770
NCBI-ProteinID:
XP_018843146
UniProt:
A0A2I4GGX2
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Position
11:26622045..26627501
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AA seq
585 aa
AA seq
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MLESTRPRTTCRLPTLAPMFEDDCMELVWENGQILMRGRSGRAQKGHSWTGYSLSSSNAQ
AENGENMHTKKARLETSCSTLNDTAFLGLLGRRDSDINSTDNNNSSQTGYHLESSPQLYK
FNLEDNKGKSEDKKSKHSRPFQEPELATSGYSRASETVLGPKLNSSKTLLPTGTEQHTST
LPERDSQPDKKYGAVKISYSRSPAILQASSQSSGVTRPTSSLVFTGVQETKGGNDERPPP
LGGRNALKSTVIEQATASKSVTGIQNQAQAELLPPVAKTKEPLPREHSEAFGNQTSSLAE
NTRKGKTDVKILTKPPVTSSSVCSLGASNDPTYSLRRTYEETESSAGPSENVEEPQGLRK
QAPGRSCTGGKRSRTAEVHNLSERRRRDKINKRMRVLKELIPNCNKVDKASMLDEAIEYL
KTLQLQLQIMSMGNGVCMHPMMLPTAMQHINAAHLTHFSAMGAGMGMRMGMGMGCSPAQF
STSQVGATALPGITGTSFQMLGFPGQAFPMPVSHPSFFPSLGSQPNQSVLAHGISGASPL
VEHLGSVPLTGSEDFSQNIYSEKINHGNTESSKIQTSSLHFPPVQ
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaatcaacacgaccaaggacgacatgccgtttacctactctagctcccatgttt
gaggatgactgtatggagctggtgtgggaaaatggtcagattcttatgcgagggcgatca
ggtagagctcaaaagggtcattcttggactggttattctttatcctcctccaatgctcag
gcagaaaatggagaaaatatgcacacaaagaaagcaaggctagagaccagttgttcgact
ctgaatgacacggctttcttaggtctcttaggtcgcagggattctgatatcaactctacc
gataataataattcttcacaaactggttatcatcttgaatcatcgccccaattatataaa
ttcaatttggaagacaacaaaggcaagagcgaggacaagaagtccaaacattccagacct
ttccaagaaccggagcttgctacctctgggtattcccgagcatcagaaacagttttagga
ccaaaactgaactcaagcaagaccttattgccaacgggtactgaacagcacacatcaacc
ttaccggagcgtgattctcaacctgataagaaatatggagcagtgaaaatctcttactca
cgatctccagctattctccaagctagtagtcagagcagtggcgtgacaaggccaacaagt
agtctggtttttacaggagttcaggagacgaaaggtggcaacgatgagaggcctcctcct
ctgggtggtagaaacgctcttaaatcaacagtgattgaacaggctactgcttcaaaaagt
gtaacaggtattcagaatcaagcacaagcagagcttctaccacctgttgccaagacaaag
gagccactgcctcgtgagcactctgaagcttttggaaaccaaacctcgagcttagcagaa
aatacacggaaaggaaagaccgatgtgaagattttaactaagccacccgttacatcttct
tccgtatgctcacttggagcttcgaatgatccaacatattctttgaggaggacttacgag
gaaactgagtcgtcggcaggtccaagtgagaatgttgaagaaccgcagggtttaagaaaa
caggcgcctggtcgtagctgtactggtggcaagagaagccgaactgcggaagttcataat
ttgtctgaaaggaggcgaagagacaaaattaacaaaaggatgcgtgtattaaaagaactc
ataccgaattgcaataaggtggataaagcttcaatgcttgatgaggccattgagtatctg
aaaaccctacagcttcaactacagattatgtcgatgggaaatggagtttgtatgcatcca
atgatgttacctacagcaatgcaacatatcaatgcagcacatttgacacatttctctgcc
atgggtgctgggatgggtatgagaatgggcatgggaatgggttgcagcccagcacagttc
tctacatcacaagtaggagccactgctctgcctgggattacaggaactagctttcaaatg
cttggatttcctggtcaagcatttcccatgccagtttcacacccttccttctttccttcg
cttggaagccaacctaaccaatcagttctagcacatggcatctctggagcctccccactt
gtagaacatcttggttctgttcccctaacaggttcagaggatttcagtcagaacatctac
tcagaaaagattaaccacggaaatacagaatcctcaaagatccaaacatcaagcttgcac
tttccacctgtccaataa
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