Juglans regia (English walnut): 109009026
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Entry
109009026 CDS
T05245
Name
(RefSeq) RING-box protein 1a-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03420
Nucleotide excision repair
jre04120
Ubiquitin mediated proteolysis
jre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109009026
04120 Ubiquitin mediated proteolysis
109009026
09124 Replication and repair
03420 Nucleotide excision repair
109009026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jre04121
]
109009026
03400 DNA repair and recombination proteins [BR:
jre03400
]
109009026
Enzymes [BR:
jre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
109009026
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109009026
Multi subunit type E3
SCF complex
Ring finger protein
109009026
Cul2 complex
109009026
Cul3 complex
109009026
Cul4 complex
109009026
Cul7 complex
109009026
Cul8 complex
109009026
Cul9 complex
109009026
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
109009026
TCR (transcription coupled repair) factors
Cul4-CSA complex
109009026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
109009026
NCBI-ProteinID:
XP_018844896
UniProt:
A0A833YC44
A0A2I4GLX3
LinkDB
All DBs
Position
1:complement(34206126..34210490)
Genome browser
AA seq
118 aa
AA seq
DB search
MATLDSDVPMVPAGEPSSSSVPSSSTKKNKRLEIKKWNAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccttggactccgacgtgcccatggtccccgctggcgagccctcgagcagctcc
gtcccttcctcctccaccaaaaagaacaaacgcttagagatcaagaagtggaatgccgtc
gctctttgggcctgggatatcgtggttgataactgtgccatttgcagaaaccatatcatg
gatctatgcattgagtgccaagctaaccaggctagtgccactagcgaggaatgtacagtt
gcttggggggtttgtaaccatgcctttcatttccactgcatcagccgatggctcaagacc
cgtcaagtatgtccattagataacagcgaatgggagtttcagaagtatggtcactag
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