KEGG   Juglans regia (English walnut): 109009026
Entry
109009026         CDS       T05245                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
jre  Juglans regia (English walnut)
Pathway
jre03420  Nucleotide excision repair
jre04120  Ubiquitin mediated proteolysis
jre04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109009026
   04120 Ubiquitin mediated proteolysis
    109009026
  09124 Replication and repair
   03420 Nucleotide excision repair
    109009026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:jre04121]
    109009026
   03400 DNA repair and recombination proteins [BR:jre03400]
    109009026
Enzymes [BR:jre01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     109009026
Ubiquitin system [BR:jre04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   109009026
  Multi subunit type E3
   SCF complex
    Ring finger protein
     109009026
   Cul2 complex
     109009026
   Cul3 complex
     109009026
   Cul4 complex
     109009026
   Cul7 complex
     109009026
   Cul8 complex
     109009026
   Cul9 complex
     109009026
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109009026
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109009026
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 109009026
NCBI-ProteinID: XP_018844896
UniProt: A0A833YC44 A0A2I4GLX3
LinkDB
Position
1:complement(34206126..34210490)
AA seq 118 aa
MATLDSDVPMVPAGEPSSSSVPSSSTKKNKRLEIKKWNAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 357 nt   +upstreamnt  +downstreamnt
atggcgaccttggactccgacgtgcccatggtccccgctggcgagccctcgagcagctcc
gtcccttcctcctccaccaaaaagaacaaacgcttagagatcaagaagtggaatgccgtc
gctctttgggcctgggatatcgtggttgataactgtgccatttgcagaaaccatatcatg
gatctatgcattgagtgccaagctaaccaggctagtgccactagcgaggaatgtacagtt
gcttggggggtttgtaaccatgcctttcatttccactgcatcagccgatggctcaagacc
cgtcaagtatgtccattagataacagcgaatgggagtttcagaagtatggtcactag

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