KEGG   Juglans regia (English walnut): 109017895
Entry
109017895         CDS       T05245                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
jre  Juglans regia (English walnut)
Pathway
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109017895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:jre03041]
    109017895
Spliceosome [BR:jre03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109017895
 Complex B
    109017895
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    109017895
SSDB
Motif
Pfam: SMN_Tudor Agenet TUDOR
Other DBs
NCBI-GeneID: 109017895
NCBI-ProteinID: XP_018855654
UniProt: A0A2I4HHK9 A0A833WVB5
LinkDB
Position
16:28566624..28572464
AA seq 301 aa
MQGGGGEEVSIEELASNLATYKDQLLQVRQILVDDPGNSEYVDMERELKEVIALTEELLA
TAKQNDISGSNTGRSGRTSPNILLSENNNMDSRSIFYNHENFPIGTKVQAVWSEDGEWYE
AMIEAHTPNGYYVCYDGWGNKEEVDPANVRPIQEGVINALTEAERAAEATKQAIKRKIAL
AAATDFQSRSLPAKLHIDPDDPEDVKAAKRKKIHAFKSKMRFEQLEVTQNKRQNAWQQFQ
STKGKTKKIGFFSGRKRESIFKSPEDPQGKVGVTGSGKGLTEFQKREKHLHLKGATVETD
D
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcaaggtggaggaggggaagaggtgagcatagaagagctggcctcaaatctcgctacc
tacaaggatcagcttcttcaggtcagacagatattggttgatgatcctggaaattccgaa
tatgtggacatggaaagggagcttaaagaggtgattgctttgacagaagagctccttgca
actgcaaagcaaaatgatatttctggatcaaatactgggagaagtggtaggacatcccca
aatatactcctgtctgagaataataacatggactcaagaagcattttttataatcacgaa
aattttccaattggcacaaaagttcaagctgtttggagtgaagatggggagtggtatgaa
gcaatgattgaggcacatactccgaatggctattatgtttgttatgatggatgggggaat
aaagaagaggtggatcctgctaatgtaagaccaattcaagagggggtcatcaatgctttg
actgaagctgagagagcagctgaagctaccaaacaagctatcaagcgtaagattgcactg
gctgctgccacggacttccagtcacggagtttaccagcaaagcttcatatagatcctgat
gacccagaggacgtgaaagctgcgaagcgtaagaagatacatgcttttaagtcaaagatg
cggtttgagcaacttgaagtcacacagaataagcggcagaatgcttggcagcagttccag
tccaccaaaggcaagactaagaagattggtttcttttcgggtcgcaaacgggaaagtatc
ttcaagtctcctgaagacccacaaggtaaggttggtgttactggaagcggaaagggttta
acagagttccaaaagagggaaaagcatttgcatctcaagggagcgaccgttgagactgat
gattag

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