Juglans regia (English walnut): 109018735
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Entry
109018735 CDS
T05245
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
jre
Juglans regia (English walnut)
Pathway
jre04075
Plant hormone signal transduction
jre04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109018735
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
109018735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jre03000
]
109018735
Transcription factors [BR:
jre03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109018735
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
109018735
NCBI-ProteinID:
XP_018856447
UniProt:
A0A833XBK9
A0A9B6BVL3
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Position
7:complement(177125..182484)
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AA seq
732 aa
AA seq
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MPLSELYRMAKGKLDSNQEKNTTSSTDLSFLPENDLFELVWENGQILKQGQSSRARKSPT
SNSLPSYCLPSHTVKTRDKDMGNGNSSKVGKFGVLDSVLSEIPVSVPSSEIDLSQDDDMM
PWLNYPIHEPLQHEYCSEFLPEFSCVTGNELSTDSNVASGDKRNSCNMVYRDCHTDSVND
GVSLGQGDVSKVSQVGGGDATISRTNFRPFHSLSQQCQTSLPSLRSKVSDVTGNNTSNVM
HHTLCGDSTRVASAADGFHSIQLQKKDPRPPGNNSNLMNFSHFSRPAALVKANLQNIGLM
AGSGSSMQRIASKDKGSAAPSKNSPESTIIDSSSGSRKESSSHRQPVTFPSKVDLKPLDD
KPVEEPIASIQSEAVCQEDASKNDKTSNQVLGESATKGLRDCEKTTEPVVPSSSVCSGNS
VERASDDPTHNLKRKGHDTEESECHSEDVEQESVGAKKAAPARGGTGSKRSRAAEVHNLS
ERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQFQVQIMSMGAGLYMPPMM
LPTGMQQMSAPHMAHFSPMGLGMGMGMGMSFGMGMPDMNGGSSGYPMIQVPPVQGAHLPV
PPISGRTAFHAMAGSNLPMFGLPSQGIPMSMSCAPIIPLSGGPLMKSAAGPNACGVVGPM
ENVDSALASTSKDPIQTINPQVTHSTGANSSMNETSKKCPTTNSAFESSTLVQNNGQAPD
VTGNAALNCERK
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgtctgagctgtatcgaatggctaaagggaagcttgattctaatcaagagaag
aacacaacgtcttcaactgatctatcttttctacctgagaatgacctttttgagcttgta
tgggaaaatggtcagattttgaagcaaggtcagtccagcagagctagaaagagcccaact
agtaacagcttaccatcttactgtttaccatctcacaccgttaagacaagagataaagat
atgggaaatggcaacagttcaaaggtggggaagtttggcgtcttggactctgtattgagt
gaaatcccagtgtcggtgccgtccagtgaaattgatttgagtcaagatgatgacatgatg
ccttggttgaattatccaatccatgaacctttacagcatgaatattgttctgagttcttg
cctgaattttcttgtgtcactggaaatgaactatccaccgatagtaatgtggcatctggg
gacaagagaaatagttgtaatatggtctatagggattgccataccgattctgtaaatgat
ggtgtgagtttaggacagggggatgtgtcaaaggtttcgcaagtgggaggtggcgatgcc
acaatatctagaactaattttcgtccattccactcgttatcacaacaatgccaaacatca
cttccatcacttagatcaaaggtttcagatgtcactggcaataatactagcaacgtcatg
caccacactctgtgtggagattcaacacgggttgcatctgctgcagatggatttcatagc
atacagttgcagaagaaagatccaaggccgcctggtaataactccaatctgatgaatttc
tcgcatttctcacgaccggctgctctcgtgaaagctaatcttcagaacattggcctgatg
gctggttcgggatcaagcatgcaaaggatagcgagcaaggataaaggttctgctgcacct
agtaaaaattctcctgaatcaacaattatcgattcaagtagtggttcccggaaagaatca
agttcccatcgccaacctgtcacattcccatccaaggttgatttaaaaccattggatgat
aagcctgttgaggaaccgattgcctctattcaatctgaggctgtttgtcaagaggatgcc
tctaagaatgataaaacctccaatcaagtccttggggaaagtgcaacgaaaggactacga
gattgtgagaagactacagagcctgttgttccttcctcttctgtttgctcaggcaatagt
gtggaaagagcttcggacgatccaacacataatttgaagaggaaaggtcatgatactgaa
gagtctgaatgccatagtgaagacgttgagcaggaatcagtgggtgcaaaaaaagcagct
cctgctcgagggggtacgggttctaagagaagccgagcagcagaagtgcataatctatca
gaaaggaggcgaagagataggattaatgagaagatgcgtgcattacaagaactcatacca
aactgcaataaggtggataaagcatcaatgcttgatgaggccattgagtatcttaagacg
cttcaatttcaagtgcaaattatgtccatgggagctggtttgtatatgccacctatgatg
ttaccaacaggaatgcaacaaatgagtgcacctcatatggctcatttctctcctatgggt
cttggaatgggaatgggaatgggaatgagttttgggatgggtatgcccgacatgaatggt
ggatcttctgggtatcctatgattcaggtgccccctgtgcaaggagcacatttacctgtc
ccacctatatccggacgcactgctttccatgcaatggcaggatctaaccttccgatgttt
gggcttcctagtcaaggaattcccatgtcgatgtcatgtgcacccataattcctctgtcg
ggagggcctcttatgaaatcagctgcaggaccgaatgcctgtggggttgtaggtcctatg
gaaaatgtggattcagctctagcttccacctcaaaggatccaatacagaccattaatcct
caagtgacgcacagcacaggtgccaatagctcaatgaatgagacatctaaaaagtgtcca
actacaaattcagcgtttgagtcgtctactttggtgcaaaataatggtcaagccccagat
gttactggcaatgcagctctcaactgtgaacggaaatga
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