Juglans regia (English walnut): 109019001
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Entry
109019001 CDS
T05245
Name
(RefSeq) uncharacterized protein LOC109019001
KO
K12865
polyglutamine-binding protein 1
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109019001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
109019001
Spliceosome [BR:
jre03041
]
Complex B
Other components
Prp19 complex
109019001
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WW
WW_TCERG1
WW_USP8
Motif
Other DBs
NCBI-GeneID:
109019001
NCBI-ProteinID:
XP_018856754
UniProt:
A0A2I4HKR6
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Position
4:complement(30785028..30805004)
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AA seq
618 aa
AA seq
DB search
MDNSQDQPLPPGVHFLPNYSSAVPSVPFPPQHGDITVRPQYHPNYSGNYLFPSSNSTFTP
NQGSYLHNSPSTQYKFSPNAPDFSGQIPQNSQTDNALQSSLTQQDADLIAQQPQDQDTAV
EKILLHKDRTIPQQTGHFDGNSNDSTGYSRLHVENARDIETAAQDAVLREQEIATQNIIQ
HHREARGFSGPSEDGKDIFSERRDPNALKEHLLKMTSQHRAEMAVKRGKSTVHEEGNLEI
GNGYGVPGGGAYYGAPKPNTDNPSKSSKLPDYLKQKLRARGILKEDTEKGSPKSETGSTQ
LVDNGKLPSKWVEVKDPASGASYYYNKSTGKSQWEKPVETPPIRQHPLPLSIPIPEGWIE
ALDETTGHKYYYNTKTHISQWERPDSSLQVSLQHSDSIVPRSAPDAKQDDQSSQENRCFG
CGGCGVGLVRMSGYCSHCTGNAANSIWNDQSSELIKCMGCGGWGVGLVQMWGYCNHCTRV
LNLPQCQYLSSSNSASTKEDSDKKASKQRSNGKPPVGKGNRRGSRKRDYTEDDELDPMDP
SSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQRPYPSPGAVLRKNAEIASQTKKVGSH
FAPISKKGDGSDGLGDAD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggataattcccaagaccaaccacttcctcctggtgtccatttcttgccaaactattct
tctgcggttccatcagtcccattccctcctcaacatggtgatattaccgtcagacctcag
tatcaccctaactattctggaaattacctcttcccctcttctaattccaccttcactcct
aatcaaggctcatatctccataatagtccatcaactcaatacaaattttctccaaatgct
cctgatttttcaggtcaaattccccaaaactctcaaactgacaatgctcttcaatcgagt
ttaacccaacaagacgctgacctcattgcacagcaaccacaagaccaagacacagcagtt
gagaaaattctcttgcataaagatcgtacaatacctcaacaaacgggtcatttcgatgga
aatagtaatgactctactggctactccagacttcatgttgaaaatgccagggacattgaa
actgctgctcaggatgctgttttgcgtgaacaggaaatcgccacccaaaacatcatacaa
catcacagagaagcaagaggcttcagtggaccttctgaggatggtaaagacattttttct
gaacgtcgtgaccccaatgctctaaaggaacatctattgaagatgacttcacaacatcgt
gctgaaatggctgtaaagcgggggaagtctactgtgcatgaagaaggtaatttagaaatt
ggaaacgggtatggtgtacctggtggaggtgcttattatggtgctccaaagcctaatact
gataaccccagtaaatctagcaaattgcctgattaccttaagcagaagttgcgagcaagg
ggtattcttaaagaagatacagaaaaaggctctccaaagtcggagactggttcaactcaa
cttgtggataatggaaagttgccttccaaatgggtggaggtaaaagaccctgctagtggt
gcttcatattattacaataagagtactgggaagagtcagtgggaaaagccggttgaaaca
cctcctattagacaacatccattgcctttatctattcctattccagaaggttggatagag
gctttggatgaaacaacaggtcataaatattattataatacaaagacccacatatcacaa
tgggagcgtcctgattcatcactgcaggtttctttgcaacattctgacagcatagtcccc
agaagtgcccctgatgcaaagcaggatgatcagtcatcccaagaaaatagatgcttcgga
tgtggtggctgtggagtaggccttgtccggatgtcgggttactgcagtcattgcactgga
aatgcagctaattcgatttggaatgatcaatcatctgagctaataaagtgcatggggtgc
ggaggttggggagtaggccttgtgcagatgtggggttactgcaatcattgcacaagagtt
ctcaatcttccacaatgccagtacttgtcttccagtaattctgcaagcaccaaagaagat
tctgacaaaaaggcttctaaacaaaggtccaatgggaaacctccagttggaaaaggaaat
agaagaggaagcaggaaacgtgattatactgaggatgatgagttggatcccatggaccca
agctcttattctgatgctcctcgtggtggctgggttgtaggcctaaaaggagtgcagcca
cgggcagctgataccactgccacaggtcctctctttcaacagcgtccatacccatcaccg
ggtgcagtattgcggaaaaatgctgaaattgcttcacaaactaagaaagtcggctcccat
ttcgcacctatatccaagaaaggggacgggagtgatggactcggtgatgcagattga
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